| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4035 |
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| Symbol | |
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| ID | 3961714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4498606 |
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| End bp | 4500441 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637918859 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_525264 |
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| Protein GI | 89902793 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTAC CCATCCAGGA CTATGCACTG ATCGGCGACT GCCACACCGC CGCGCTGGTC
GGCCGCGACG GCTCGATCGA CTGGCTGTGC CTGCCGCGCT TTGACGCCGG TGCCTGCTTT
GCGGCCCTGC TGGGCAGCCC CGACCACGGA CGCTGGTTGC TCGCGCCGGC CGCTGAAGTG
CGCGCGGTGC GCCGGCGCTA CCGCGACGGC ACACTGATCC TGGAAACCGA ATTCGACACT
GACGACGGCG CGGTCCGCGT CATCGACTGC ATGCCGCTGT CGAAGGAGCG TTGTGACCTC
GTGCGCATCG TCGAAGGCCT GCGCGGGCGC GTTCACATGC GCATGGAACT GGTCATCCGC
TTCGACTACG GCGCGATCGT GCCGTGGGTG CGCAGGACCG ACGGCACGCT GCTCGCCACC
GCCGGGCCGG ACACGCTGGA GCTGCACACC ACGGTGCCGA CCCATGGCGA GCAGATGAAG
ACCGTGGCCG AGTTTGAGGT GGGCGCCGGC GAGCGTATGG CCTTCGTGCT CAGCTACCGG
CCGTCGCACG AGGCCCAGCA GCCCCCGATT GATCCCGAAC AGGCGCTGCA ACAAACACAA
GACGATTGGC TGACCTGGTC GCAGCGTTGC ACTTACCAGG GTCGCTGGCG CGCTGCCGTG
CTGCGCTCGT TGATCACGCT CAAGGCGCTG ACTTACCAGT CCACCGGGGG CATCGTTGCG
GCGCCCACCA GCTCACTGCC CGAACAGCGC GCTGGCGTGC GCAACTGGGA CTACCGCTAC
TGCTGGCTGC GCGACGCCAC CTTCACGCTC AATGCACTGC TGCTCACCGG CTACACCGAA
GAGGCGCTCG CCTGGCGCGA ATGGCTGCTG CGCGCCGTGG CCGGCAGCCC CGCCGACCTG
CAGATTCTTT ACAGCGTGAC CGGCGTGCGC CGGCTTGACG AAATCGAACT CGACTGGCTG
CCAGGCTACG GCCATGCCGC GCCGGTGCGC GTTGGCAACG CGGCGGCCAA GCAGTTCCAG
CTCGACGTTT ACGGCGAAGT GATGGACACG CTGCACCTGG TCCGCGCCGC CGGCTTGCCA
CCCGAGCCAC ATGTCTGGGA GATCCAGCGG GCGCTGCTCG ACTTTCTGGA CACGCACTGG
CAGGGACCTG ACGAGGGCAT CTGGGAAATG CGCGGGCCGC AGCGCCAGTT CACGCATTCG
AAGGTGATGG CCTGGCTCGC CTTCGACCGT GCTGTCAAGG CGGTCGAGCG CTTTGGCCTG
GACGGACCGG TCAATACATG GCGGGTCACG CGCGACACCA TTCACGCCCA GGTCTGCGAG
CTCGGCTTCG ATGCGCGGCG CAACAGCTTC GTGCAGTACT ACGGCGCGGC CGATCTCGAT
GCCAGTCTGC TGATGATCCC GCTGGTTGGC TTCCTGCCGC CCGACGATGC GCGTGTGCGC
GGCACGGTCG AGGCGATCCA GCGCGAACTC ATGGTTGACG GTCTGGTGAT GCGCTACGCC
ACGGCGAGCG GGGTCGACCG GTTACCACCC GGCGAGGGCG CCTTCCTGCC GTGCACGTTC
TGGCTCGCCG ACAGCCTGGC GCTGATCGAC CGACGCGACG AAGCTGAGGC CCTGTTTGAG
CGGCTGCTTG CGCTGTGCAA CGACGTCGGC CTGCTGTCAG AGGAGTTCGA TCCGCGCAGC
GGCGACATGC TTGGCAATTT TCCGCTGGCG CTGACCCACG TGGCATTGGT CAACACGGCG
TGGCTGCTGT CGCTGCCCCA ACGGCAGATC GAAAAATCAT GCGAACAAGG GGAACGCCCC
GCGGCTGCGG TGCCCCCACC AGTTCAATCA CCATGA
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| Protein sequence | MPLPIQDYAL IGDCHTAALV GRDGSIDWLC LPRFDAGACF AALLGSPDHG RWLLAPAAEV
RAVRRRYRDG TLILETEFDT DDGAVRVIDC MPLSKERCDL VRIVEGLRGR VHMRMELVIR
FDYGAIVPWV RRTDGTLLAT AGPDTLELHT TVPTHGEQMK TVAEFEVGAG ERMAFVLSYR
PSHEAQQPPI DPEQALQQTQ DDWLTWSQRC TYQGRWRAAV LRSLITLKAL TYQSTGGIVA
APTSSLPEQR AGVRNWDYRY CWLRDATFTL NALLLTGYTE EALAWREWLL RAVAGSPADL
QILYSVTGVR RLDEIELDWL PGYGHAAPVR VGNAAAKQFQ LDVYGEVMDT LHLVRAAGLP
PEPHVWEIQR ALLDFLDTHW QGPDEGIWEM RGPQRQFTHS KVMAWLAFDR AVKAVERFGL
DGPVNTWRVT RDTIHAQVCE LGFDARRNSF VQYYGAADLD ASLLMIPLVG FLPPDDARVR
GTVEAIQREL MVDGLVMRYA TASGVDRLPP GEGAFLPCTF WLADSLALID RRDEAEALFE
RLLALCNDVG LLSEEFDPRS GDMLGNFPLA LTHVALVNTA WLLSLPQRQI EKSCEQGERP
AAAVPPPVQS P
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