| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4016 |
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| Symbol | |
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| ID | 3961695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4480947 |
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| End bp | 4481597 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637918840 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_525245 |
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| Protein GI | 89902774 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCT TTGACGACCT GCCCCTGCCC CCCGAGGCCG CGCTGACGCC AATCGCGCCC
GGCGCGGTGC TGTTGTACGG CTTTGCCAGG GGCGGTGATG CCGCCCTGCT GCAAGCCATC
GAGTCCGTCC TCAGTCAAGC TCCCTTGCGC CACTGGCAAA CCCCCGGCGG CTACACCATG
TCGGCGGCCA TGAGCAATTG CGGCCCGCTG GGCTGGGTGT CCGGCGCCAG CGGCTACCGC
TACGCCGCGT TGGACCCACT CTCGGGCCAG CCCTGGCCCG CCATGCCCGC CTGCCTGATG
GACCTGGCCC GGCGCGCCGC TGCGCAGGCC GGCTACGCGA ACTTCACGCC CGATGCCTGC
CTGATCAACG AATACCTGCC CGGGGCCAAA CTCTCGCTGC ACCAGGACAA AGACGAAAAA
GACCTGCGCG CGCCCATCGT CTCGCTGTCT CTGGGTTTGC CGGCGGTGTT TCTGTTCGGC
ACCCCCAGCC GCAAAGACCG CCCCCAGCGC TGGCGGCTGG TGCATGGCGA CGTGGTGGTG
TGGGGCGGCC CGTCACGGCT GGCCTACCAC GGCGTGGCCG CACTGGCCGA TGGTGAGCAT
GCGCTGCTGG GGCGGCGCAG GTTGAACCTG ACGTTTCGGT GTGTGAAGTA G
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| Protein sequence | MDLFDDLPLP PEAALTPIAP GAVLLYGFAR GGDAALLQAI ESVLSQAPLR HWQTPGGYTM
SAAMSNCGPL GWVSGASGYR YAALDPLSGQ PWPAMPACLM DLARRAAAQA GYANFTPDAC
LINEYLPGAK LSLHQDKDEK DLRAPIVSLS LGLPAVFLFG TPSRKDRPQR WRLVHGDVVV
WGGPSRLAYH GVAALADGEH ALLGRRRLNL TFRCVK
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