| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4004 |
|---|
| Symbol | |
|---|
| ID | 3961683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4466149 |
|---|
| End bp | 4466463 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637918828 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_525233 |
|---|
| Protein GI | 89902762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.38345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTC GTACTCTTCT TGCCGCCTTT GTTGCCGCAG TGGCTCTGCT CACCGCCACC
GGCTGCGCCG TCACGCGCGG CCAGGAAACC GTCGGCGCCT ATATTGACGA TGCCACGATT
ACCACCCAAA TCAAGGCGCG CTTCGTCGAC AACACGCAGG TCGCCGCGAC CAGCATCAAG
GTCGAAACCC TCAATGGCGT CGTCCTGCTG TCGGGCTTTG CCAAGAACAC CACGGAGAAA
AGCACGGCGG AGAGCATCGC GCGTGGTGTG AACGGGGTGA AATCCGTGAG GAACGAGATC
GTCGTGCGTC CGTGA
|
|---|
| Protein sequence | MIIRTLLAAF VAAVALLTAT GCAVTRGQET VGAYIDDATI TTQIKARFVD NTQVAATSIK
VETLNGVVLL SGFAKNTTEK STAESIARGV NGVKSVRNEI VVRP
|
|---|
| |