Gene Rfer_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3998 
Symbol 
ID3961658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4460660 
End bp4461406 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID637918822 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_525227 
Protein GI89902756 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCC TCCGCCATCT GTATTCTGCT GCACGCCTGC GCTTCGCACT GGTGATGCTG 
GGTGTGGGGT GTCTGTTGTG GACGGTCCTG GCCTTGCCCT TGGGCCTGGT CTTGCCCAGC
CGTTGGGGCA TGTGGGTGGG GCGCTGGATG GCCACGCTCG GGTTCCGGGC CTATATTTGG
CTGTTGGATG TCATTGGTCT GGGTCGCTTC GACATTGCTG CGCTGGACAC CCTGCGTGGC
GCGGGTCCTC TGATACTGGC CGTCAACCAC CCTGGTTTAC TGGATGCGCT GATGGTGCTG
TCCCGGCTGC CGAATGTGAC CTGTATTCTC AAGGCGTCGC TGATGCGCAG TCCCCTGTGG
GGGGCCGGTG CCCGCCTGGC CGGATACATT CGCAACGACC TGTTTCTCGG CGCGGTCAAT
CTGGCGGTGG ACGAATTGCA CCATGGCAGT CAGCTCCTGT TGTTCCCCGA GGGTACGCGC
AGCGACCCGA TGCCCCTGGG CGAGTTTCAG ATCGGCGCGG CCTATATGTC CTACCGCTCC
GGCATTCCGA TTCAGACCAT CATCATCGAA CAGGACAGCC GGTTTTTGGG CAAGGGTTGG
CCATGGCTGA AGCGACCCGA CATGCCCATG CACTTTCGCA TTCGCCTGGG CCAGCGATTT
GATCCACCGA CCAACCCCAA GGCATTCACG TTGACCCTGC ATGACTATTT TCGCAGCGAG
ATCAAGCCGC TCTCCGGCGG GGCCTGA
 
Protein sequence
MQFLRHLYSA ARLRFALVML GVGCLLWTVL ALPLGLVLPS RWGMWVGRWM ATLGFRAYIW 
LLDVIGLGRF DIAALDTLRG AGPLILAVNH PGLLDALMVL SRLPNVTCIL KASLMRSPLW
GAGARLAGYI RNDLFLGAVN LAVDELHHGS QLLLFPEGTR SDPMPLGEFQ IGAAYMSYRS
GIPIQTIIIE QDSRFLGKGW PWLKRPDMPM HFRIRLGQRF DPPTNPKAFT LTLHDYFRSE
IKPLSGGA