Gene Rfer_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3997 
Symbol 
ID3961657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4459868 
End bp4460656 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID637918821 
Productglycosyl transferase family protein 
Protein accessionYP_525226 
Protein GI89902755 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTCCA AGCGCACTTT GCCCTCCACC ACTCATCTGG TGCTGATCCC CAGCTACAAC 
TCTGGTGCCA AGGTCTATGA GACCGTGGCG CAAGCCCGCG TCCACTGGAA TCCGGTGTGG
GTCGTGGTCG ACGGCAGCAC CGACGGCACC GCCGCCGTGT TGCAGGACAT GGCGGCCCGG
GACGCGGGGC TGCGGGTTAT TGTGCTGCCC AAGAATCAGG GCAAAGGCGC GGCTGTGTTG
TATGGACTGG ATCAGGCTGC GCAACAGGGT TACACCCATG TCCTGTGCAT GGACTCCGAT
GGCCAGCACC CGGCGAACCT GATAGAAGCT TTCATGCATT GCTCACAGGC CACACCTGCG
GCCATGGTGT TGGGCGTACC GGTATTCGAT GCCAGCGCAC CGGCGCTGCG CGTCTGGGGA
CGAAAAATAT CCAACTGGTG GGCGAATCTG GAAACCTTGT GGGCCGGCAT TGGCGACTCA
CTGTACGGTT TTCGTGTCTA CCCGGTGGAC CCATTGCGCA GTGTGATGCG GGGCCAGCGC
TGGATGCGCC GTTTTGATTT TGACCCCGAG GCCGCCGTGC GCTTGTGCTG GCGGGGCGTG
CCACCGATCA ATCTGCCGGC ACCGGTGAAG TATTTGCAGG CGCATGAAGG CGGTGTTTCC
CATTTCAACT ACCGCCGTGA CAACCTGCTA CTGACCTGGA TGCACATCCG CTTGATGGTG
GGGTTTGTGC TGCGTCTGCC GATGTTGCTG ATGCGGGCGT TGGGCCGTCG CTCAAGCCTG
GGCAAGTAG
 
Protein sequence
MHSKRTLPST THLVLIPSYN SGAKVYETVA QARVHWNPVW VVVDGSTDGT AAVLQDMAAR 
DAGLRVIVLP KNQGKGAAVL YGLDQAAQQG YTHVLCMDSD GQHPANLIEA FMHCSQATPA
AMVLGVPVFD ASAPALRVWG RKISNWWANL ETLWAGIGDS LYGFRVYPVD PLRSVMRGQR
WMRRFDFDPE AAVRLCWRGV PPINLPAPVK YLQAHEGGVS HFNYRRDNLL LTWMHIRLMV
GFVLRLPMLL MRALGRRSSL GK