Gene Rfer_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3988 
Symbol 
ID3961648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4451513 
End bp4451815 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content62% 
IMG OID637918812 
Producthypothetical protein 
Protein accessionYP_525217 
Protein GI89902746 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTG TCGCACTGCC ATTTGCTGCG GACCATCCGG TGTTTGCGGG CCATTTCCCC 
GGGCACCCGA TCGTGCCCGG CGTGCTGTTG CTGGATTGGG CGCAGGCGGC TATTGAAGCC
CAACTGGGTC ACCACCTCCA GGCGCTGGCC GAAGCCAAAT TCCACAGTCC AGCCACGCCT
GCCGACCCTC TCGAACTTGG TTTTGAAGTC GGCAACTCTG CCGTGCGCTT CGAAATTCGT
AGCGCGACAC GCAAGATTGC CAGCGGCCGC TTTCCCTTGC CACCAAGCGC AACCCATGAG
TGA
 
Protein sequence
MPVVALPFAA DHPVFAGHFP GHPIVPGVLL LDWAQAAIEA QLGHHLQALA EAKFHSPATP 
ADPLELGFEV GNSAVRFEIR SATRKIASGR FPLPPSATHE