| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3983 |
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| Symbol | |
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| ID | 3961643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4446714 |
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| End bp | 4447568 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918807 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_525212 |
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| Protein GI | 89902741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCTGC CAAGGCCCGC ACAAACACCC CTGGCCAAAC CTCGCCCGTG GCACCCTGGA
CCGTTTCTGC TGGCCCAGCT GGCATTACAT GTCGCGGCAC TGGTGTGGTT TCTGATTTCC
CCTCATGAAT GGCGCTGGGC GGCCGCCATT GTTCTCCTCA GTCAGTTGGT GCTGATGGCG
GCCAGCCTGT GGCCACGCAG CACTTGCCTG GGTGCCAACC TGGTGCGCCT GCCCACTGCT
GCGGTACAGC GGGCGGAAGT GGCCATCACC ATTGATGACG GCCCCGACCC CCAGGTGACC
CCACAGGTTC TGGCCATCCT CGCGCAGCAG GGTGCCAAAG CGACGTTTTT CTGCATTGGC
GAGCGTGCCG CCGCACATCC TGAACTGTGC CGCAGCATAC TGGCGCAGGG GCACCCCATT
GAAAACCACG GCGCACGCCA TCCCACCCTG TGTGCACTCT CGGGGCCCGC TGGCTGGCGA
CGCGAAATTG AGGATGGGCA ACACATCCTG CAGCGCATCA CGGGCCAGAC ACCCCACTTC
TATCGTGCTG TCGCCGGCCT ACGCAATCCC TTTCTGGACC CGGTTCTGCA TGGATTGGGC
CTGCAGTTGG CCACCTGGAC CCGCCGTGGT TTTGATACCC GCGAGCGTGA TCCTGAAAAA
GTCTTGCGGC GACTGAGCCA CCAACTCGCA GCGGGTGATA TTTTGCTGTT GCACGATGGC
AATGCAGCAC GCACGCCTTC GGGCGAGGCG CTGATTGTGG CGGTGCTGCC CAGGTTGCTG
GATGCCATCC GGGCGCACGG GCTGACCCCT GTCACGCTGG CCCATGCATG CATCCCCATC
GAAAGCGAAA GCTGA
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| Protein sequence | MNLPRPAQTP LAKPRPWHPG PFLLAQLALH VAALVWFLIS PHEWRWAAAI VLLSQLVLMA
ASLWPRSTCL GANLVRLPTA AVQRAEVAIT IDDGPDPQVT PQVLAILAQQ GAKATFFCIG
ERAAAHPELC RSILAQGHPI ENHGARHPTL CALSGPAGWR REIEDGQHIL QRITGQTPHF
YRAVAGLRNP FLDPVLHGLG LQLATWTRRG FDTRERDPEK VLRRLSHQLA AGDILLLHDG
NAARTPSGEA LIVAVLPRLL DAIRAHGLTP VTLAHACIPI ESES
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