Gene Rfer_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3982 
Symbol 
ID3961642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp4446124 
End bp4446717 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content55% 
IMG OID637918806 
Productputative transmembrane protein 
Protein accessionYP_525211 
Protein GI89902740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCAC AACCCTTGCA TCGCCTGAAA CTGCTCACCG CCATCGTCGG CATGGCGCTG 
TGCGCCAGCA GCTACGGCGC AGACTGGGCA CTGCCCGATC TGATGCATTC GCTGGCCCAG 
AAGAAATCCG GCAAAGCCAG CTTTGTCGAA AAAAAATACA TCGGTATTCT GGACAAGCCA 
CTGGAATCTT CCGGTGAACT GTCTTTTGAA GCGCCGAATC GCCTGGAAAA ACGCACCCTC 
AAACCCCACC CGGAAATCAT GCTGCTGGAC GGCGACAAGC TGACCGTCAC CCTGCATGAA 
AAGCAACCAC TCTACCTGCG TCTGCAGGAC CACCCAGAGT TGGCCGCTGT GGTCGACAGC 
ATTCGCGGTA CCCTCAGTGG TGACCAGGCC GCGCTGGAAA AAAACTACAC CATCGAATTC 
ACCGGCGTGC AAAACAAATG GCAACTGACC CTGACACCGG TGCAAAAAGC CGTGACCAAG 
GTGGTGAGCC AAATCCGTAT TGGGGGTGCC GATGCAGCCA TCAAGACCAT CACATTTGAT 
CAGATCGACG GTGACCGCTC TGAAATGACC ATCTCCAAAG TTGTTGCACC TTGA
 
Protein sequence
MPSQPLHRLK LLTAIVGMAL CASSYGADWA LPDLMHSLAQ KKSGKASFVE KKYIGILDKP 
LESSGELSFE APNRLEKRTL KPHPEIMLLD GDKLTVTLHE KQPLYLRLQD HPELAAVVDS 
IRGTLSGDQA ALEKNYTIEF TGVQNKWQLT LTPVQKAVTK VVSQIRIGGA DAAIKTITFD 
QIDGDRSEMT ISKVVAP