Gene Rfer_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3969 
Symbol 
ID3961629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4435713 
End bp4436459 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID637918793 
Producthypothetical protein 
Protein accessionYP_525198 
Protein GI89902727 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTT GGCGCCAAGC GCGACAAATT TCACCGTGTA AATCACTTGT TGCCAGCGGT 
CCGGTCTGCC GCGGCACAAT GGGCGCCATG CGCAAACATA TTTCTGAAAC CACCGGTCTG
CAGCGTCTGG GCTACGGCTT GCTGGCTGGC CTGCTGACGG CGGCACTGCC GCTGCCGCTG
GTATGGCCGC TTCGCGGGCT GCTGGCATGG TGTGCGGGCA TTGCGGTCTA CCTGCTGCTG
GCCTGGTGGC TTTGCATGCG CTTTGACGGC CGGCGCACGC GCGAGCGAGC GCAGGCACAG
GACGAACCCA GTGTGGTCAT TTTTCTGGTG CTGGTATTGG CCACCCTGGC TTGCGTGGCT
GCCATTGTCT TCATGATGCA GCACACGCGG GATCTCTCGG GCATGGAGCG CACGCTGCAC
ATAGCGCTGT CGATGGCGGC GCTGGCGGCG TCATGGCTTT TCATCCAGGC TATTTTTGCC
TTTCATTATG CGCACCGTTA TTACCAGGAA GAACAACGCA AGCAGCCCGC CGGCCCCGGC
CTGCAGTTTC CCGGTGGCGG GGATCCGGAC TATTTCGACT TTCTGTATTA CGCGCATGTG
ATCGGCATGA CGTCGCAGGT GTCCGACGTG CAGGTGAGCT CGCGTGGCAT GCGCCGGCTC
ACGACGCTGC ATGCCATGCT GTCCTTTGCC TTCAATATGC TGATCCTGGC GCTCAGCATC
AATGTGGTGG GCAGCGCGCT GCAGTAG
 
Protein sequence
MSAWRQARQI SPCKSLVASG PVCRGTMGAM RKHISETTGL QRLGYGLLAG LLTAALPLPL 
VWPLRGLLAW CAGIAVYLLL AWWLCMRFDG RRTRERAQAQ DEPSVVIFLV LVLATLACVA
AIVFMMQHTR DLSGMERTLH IALSMAALAA SWLFIQAIFA FHYAHRYYQE EQRKQPAGPG
LQFPGGGDPD YFDFLYYAHV IGMTSQVSDV QVSSRGMRRL TTLHAMLSFA FNMLILALSI
NVVGSALQ