| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3963 |
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| Symbol | |
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| ID | 3961623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4429902 |
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| End bp | 4432037 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918787 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_525192 |
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| Protein GI | 89902721 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.191797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCT CCCTAGCGCC GCCCTGCGTG CCCCAAATTC GCCTCTACCA AAACTGGCTG
CGCCAGCACC GCGGCTTGTC GTTTGATTCG TACGACGCTT TGTGGCGCTG GTCGGTGACC
GATCTGGACA CTTACTGGCA AAGCATCTGG GACTACTTTG ACCTGCAGTC GCCGACGCCG
CACAGCGCGG TGTGTGACGG TGCGCCGATG CCCAACACGC GCTGGTTTAC CGGTGCCCGC
GTCAACTATG CGCAGCAGGT GTTGCGCCAT GTGGCCGCGG CCGATGCGGG CGGCTTCCCG
GCCATCCTCA GCCACAATGA AGAGACGCTA GGCAGCGCAC CGGCCCGGCA GTTGAGCTGG
CCCGAGCTGC GCCGCCAGGT CGCCTCGCTG GCACTGCACC TGCAGGCGCA AGGGGTGCTT
GCGGGCGACC GCGTCGCCGC CTACCTGCCC AACAGTGCGG AGACGATGGT GGCTTTTCTG
GCCACGGTGA GCATCGGTGC GGTGTGGAGC GTTTGCGCGC CTGACATGGG CAGCAACGCG
GTGCTGGACC GCTTCCAGCA AATCGAACCG AAGGTGCTGA TCGCCTGCGA CGGCGTCACC
TACGGCGGGC GCGAGCTGGA CCGTCGCGCG GTGCTGGCCG AGCTGTGCGC GGCACTGCCC
TCGGTGCGGC ATCTGATTCT GCAGAGCAAC CTGGGGCTGC CTACAGACAC TATTAAAACA
GTAGCTAGTC AAGCTTGTTT CACGGAGGCT ACAGGCCAAA ATGATGCAAA GACTGACGCC
TTCGAGCCGC TTTGGCTGCC CTTCGATCAT CCGCTGTGGG TGGTCTATTC GAGTGGCACC
ACGGGCCTGC CCAAACCGAT TGTGCACGGC CATGGCGGCA CGATACTGGT GGCACTGGCG
CTGAAAAACC TGCACAACGA CATCGGCTGC AGTTACGACC CCAACACGCT CGGCGAGCGC
TACCACTGGT ACAGCACCAC CGGCTGGGTG ATGTGGAACG CGCAAGCCAG TGGCCTGCTC
AGCGGCACCA CCTGCTGCCT TTTTGACGGC AGCCCGGGCG GGCGCAGCGT CGATGCCGCG
GGCAGCAAAG TGGCGCCTGA CTGGACCACC TTGTGGCGTT TTGCCGCCGA GCTGAAAGTG
ACCTTTTTTG GCGCCGGTGC CGCGTTTTAT GCCAACTGCC TGAAGGCCGA TGTGAACCTG
GGCGAATGCG GCGACCTCTC CCGTGTGCGG GCGCTGGGCA GCACCGGCTC ACCCTTGAGT
CCCGAGGCGC AGGCCTGGGG GACCGAGCAG TTTGCCCATT TGAGGGCGAA TGCCGCCGCG
CCGGGCCGCC CCAAGCAAGG CATGGCCTCC TCGGGGGGCA GCGACCCACA CGCAGTGGGC
GAGCGTGGGG GCGATATCTG GTGGTGCAAT ATTTCTGGCG GTACCGATTT TTGTGGTGCC
TTCATCGGGG GCAACCGTGA ATTGCCTTTG ATTCCCGGTG AAATGCAGTG CCGCCTGCTC
GGCTGCGCGG TCGAGGCCAG GAACGAGCAG GGTGAGCCGG TGATCGATGA GGTGGGCGAG
CTGGTGTGCA CCCAGCCGAT CCCGAGCATG CCGCTGTATT TATGGGGCGA CGTGGGCAAG
CAGCGCTACC TGGCCAGCTA CTTCGACACC TACCCCGGCG TCTGGCGTCA TGGCGACTGG
CTCAAGATCG GGCGCAACGG CGGCTGCGTG ATCTATGGCC GCTCGGATGC CACCATCAAC
CGCCACGGCC TGCGCATGGG CACCAGCGAG CTCTACAGCG CGGTGGAGGC GCTGCCCGAA
GTGCTGGACT CGATGGTGGT CGATCTCGAA TACCTGGGGC GCGAGAGTTA CATGCCGCTG
TTTGTGGTGC TGCGCGAAGG TCTGGCGCTG GACGACACCG TCCGGGCCAA GCTGGTGAAC
GCGATCAAAA CCGCCTTATC GCCGCGCTTT GTTCCCGATG AAATTTTTCA GGTGGCGGAG
ATTCCGCGCA CCTTGTCGGG CAAGAAGCAG GAGCTGCCGA TCAAGAAGCT GCTGCTGGGG
CAGCCGCTGG ACAAGGTGCT CAACCGCGAG GCGATGGCCA ACCCGGCTTG TCTGGACTGG
TATGTGGCCC TGGCGCGGGC ACGGTCGCAG CCCTGA
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| Protein sequence | MTPSLAPPCV PQIRLYQNWL RQHRGLSFDS YDALWRWSVT DLDTYWQSIW DYFDLQSPTP
HSAVCDGAPM PNTRWFTGAR VNYAQQVLRH VAAADAGGFP AILSHNEETL GSAPARQLSW
PELRRQVASL ALHLQAQGVL AGDRVAAYLP NSAETMVAFL ATVSIGAVWS VCAPDMGSNA
VLDRFQQIEP KVLIACDGVT YGGRELDRRA VLAELCAALP SVRHLILQSN LGLPTDTIKT
VASQACFTEA TGQNDAKTDA FEPLWLPFDH PLWVVYSSGT TGLPKPIVHG HGGTILVALA
LKNLHNDIGC SYDPNTLGER YHWYSTTGWV MWNAQASGLL SGTTCCLFDG SPGGRSVDAA
GSKVAPDWTT LWRFAAELKV TFFGAGAAFY ANCLKADVNL GECGDLSRVR ALGSTGSPLS
PEAQAWGTEQ FAHLRANAAA PGRPKQGMAS SGGSDPHAVG ERGGDIWWCN ISGGTDFCGA
FIGGNRELPL IPGEMQCRLL GCAVEARNEQ GEPVIDEVGE LVCTQPIPSM PLYLWGDVGK
QRYLASYFDT YPGVWRHGDW LKIGRNGGCV IYGRSDATIN RHGLRMGTSE LYSAVEALPE
VLDSMVVDLE YLGRESYMPL FVVLREGLAL DDTVRAKLVN AIKTALSPRF VPDEIFQVAE
IPRTLSGKKQ ELPIKKLLLG QPLDKVLNRE AMANPACLDW YVALARARSQ P
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