Gene Rfer_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3952 
Symbol 
ID3961592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp4419176 
End bp4419835 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID637918777 
Producthypothetical protein 
Protein accessionYP_525182 
Protein GI89902711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGTT CTTTTGTCCT GGCCCTGCTG CTGATCAATG GTCTTTACTT CGCCTGGTCG 
CAGGGTTTTT TGCAGTCTTT GGGGCTTGCA CCCGCAGCGC AGACGGAACC CCAGCGCCTG 
GCCCAGCAGA TCAAACCCGG GGCCTTGCAG GTGCGCACGG TGCAGGAGTT GCGCCTGACT 
GCAGCGCCGC CCGTGGCACC CAAGCCCGGC ACGTGCTGGC AGGCGGGCGT GTTTGAGGGG 
GCTCAGGCCA CGCTGCTGCG CGAGGCACTG GTCGCGGCAG ATTTGCCCGC AGGCGCATGG 
TCGCTGGACC CGGTCCTGGA GCCCGGGCGC TGGATCGTCT ACATGGGCAA ATTCGCCAAT 
GCCGAGGCAC TGGCGAAAAA AAGTGCTGAG CTCGCCGGCT TGAAGCTGAA AATTGAGCCC 
TTGAAAGACC CGGCGTTGCG CCCGGGACTG TCGCTGGGCG GCTACGAGAC GCAGGCAGCG 
GCCAATGCCG CACTCGCCGT CCTGGTCCAG CGCGGTGTGC GCACGGCGCG GGTGCTGCCG 
GAGCGCGCCG AGGTGCGCGG TGTGATGCTG CGGCTGCCCG CGGCCGATGA AGCGCTGCGC 
GGCAAGCTCG ATGCGCTCAA GCCCGCGCTG GCAGACAAGG CCTTGAGCCC GTGCTCGTGA
 
Protein sequence
MLRSFVLALL LINGLYFAWS QGFLQSLGLA PAAQTEPQRL AQQIKPGALQ VRTVQELRLT 
AAPPVAPKPG TCWQAGVFEG AQATLLREAL VAADLPAGAW SLDPVLEPGR WIVYMGKFAN 
AEALAKKSAE LAGLKLKIEP LKDPALRPGL SLGGYETQAA ANAALAVLVQ RGVRTARVLP 
ERAEVRGVML RLPAADEALR GKLDALKPAL ADKALSPCS