Gene Rfer_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3940 
Symbol 
ID3961580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4406105 
End bp4406782 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID637918765 
ProductFHA domain-containing protein 
Protein accessionYP_525170 
Protein GI89902699 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAA TGATCGTATC GATCGACGGT GTTGTCATCA AGGAAGTCCA ATTGACAAAG 
GACCGCACGA CGCTGGGCCG GCGGCCGTAC AACGACATCG TGATCGACAA CCTGGCAGTC
AGCGGCGAGC ATGCGGTGGT GCAAATGACG GGTGGACAGG TTTATCTGGA AGACCTGAAC
AGCACCAATG GCACCTACGT GAACGGCAAG GCGATCAAGA AGCAGTTGCT CCAGGATGGT
GACTCGGTCG AAGTCGGCAA ATACAAGATC AAATTTGTCA GCGATGTGCT CGGCGAGAGT
TATGAAAAGA CCATGATGGT CAAAGCGGGT GCCAGCGGGT TGGCGCCATC CGCTGCACCG
ACGTCGTTGA CGCCGCCCGC GAGCGCTGGT TTCGCGGCGC AAGCGAGTGC CGAGCCGCCG
GGCGCCGCAA TCAAGGTCTT GTCAGGGGCT GCGGCCGGCC GTGAAGTGCC CTTGACCAAA
GTAGTCACCA CGATCGGCAA GCCGGGTGTC GCCGTTGCCG CGATCACCCG ACGCCAGCGT
GGTTTTGTCG TGCATCACGT TGAAGGGGCG GGCAACCCGA CCCTCAACGG GGCGCCCGTC
GGGGCAGAGC AGGTGGCCTT GAAAAATGGC GATCTGATTG AGCTGGCCGG GACCCAAATG
CAGTTTGTTC AGGCTTGA
 
Protein sequence
MPKMIVSIDG VVIKEVQLTK DRTTLGRRPY NDIVIDNLAV SGEHAVVQMT GGQVYLEDLN 
STNGTYVNGK AIKKQLLQDG DSVEVGKYKI KFVSDVLGES YEKTMMVKAG ASGLAPSAAP
TSLTPPASAG FAAQASAEPP GAAIKVLSGA AAGREVPLTK VVTTIGKPGV AVAAITRRQR
GFVVHHVEGA GNPTLNGAPV GAEQVALKNG DLIELAGTQM QFVQA