Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3935 |
Symbol | |
ID | 3961575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4399110 |
End bp | 4399802 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918760 |
Product | lipoate-protein ligase B |
Protein accession | YP_525165 |
Protein GI | 89902694 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.385529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGG ACCTGTTGCG GCACCGACTT GGCCGGATCG ACTACCTTCC CGCCTACGAA GCGATGCAGG TTTTTACCGC TGCGCGCACG CCCGAGACGC CTGATGAACT ATGGATTTGT GAGCATCCCC CGGTTTACAC CCAAGGACTG GCGGGTAAGG CAGAACATGT GTTCAACCCC GGCACTATCC CGGTGGTGCA GACCAACCGG GGTGGTCAGG TCACTTACCA CGGCCCTGGC CAGGTGGTGG CCTATCCGCT GCTGGACCTG AAACGCGCCG GGTACTTCAT CAAGGAATAT GTTTACCGGA TAGAAGAAGC GGTGATCCGC ACCTTGGTGG AGTTCGGCGT GACCGGGCAC CGGGTGGCGG GTGCGCCAGG TATTTACGTG CGACTGGATG ACCCGGGCTC GCATGCGTTG CTGCCGCAGC GGCCGATGAA GTCGGGGCTG GCCAACCCCA GTTTTGGCGG CCTGGGCAAG ATCGCTGCCC TGGGGCTCAA GGTCAGCCGC AACTGCACTT ACCACGGCGT GGCGTTGAAC GTGGCGATGG ACCTGGAGCC CTACACGCGT ATCAACCCCT GCGGCTATGC GGGTTTGCAA ACAGTGGACC TTTCTACAAT CGGCGTTTGC GCTGGCTGGG ATGAGGTCGC GGAGCTGCTG GGCGACAAGC TCACCCGCTA CCTGGCGCCC TGA
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Protein sequence | MAMDLLRHRL GRIDYLPAYE AMQVFTAART PETPDELWIC EHPPVYTQGL AGKAEHVFNP GTIPVVQTNR GGQVTYHGPG QVVAYPLLDL KRAGYFIKEY VYRIEEAVIR TLVEFGVTGH RVAGAPGIYV RLDDPGSHAL LPQRPMKSGL ANPSFGGLGK IAALGLKVSR NCTYHGVALN VAMDLEPYTR INPCGYAGLQ TVDLSTIGVC AGWDEVAELL GDKLTRYLAP
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