Gene Rfer_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3935 
Symbol 
ID3961575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4399110 
End bp4399802 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID637918760 
Productlipoate-protein ligase B 
Protein accessionYP_525165 
Protein GI89902694 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.385529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGG ACCTGTTGCG GCACCGACTT GGCCGGATCG ACTACCTTCC CGCCTACGAA 
GCGATGCAGG TTTTTACCGC TGCGCGCACG CCCGAGACGC CTGATGAACT ATGGATTTGT
GAGCATCCCC CGGTTTACAC CCAAGGACTG GCGGGTAAGG CAGAACATGT GTTCAACCCC
GGCACTATCC CGGTGGTGCA GACCAACCGG GGTGGTCAGG TCACTTACCA CGGCCCTGGC
CAGGTGGTGG CCTATCCGCT GCTGGACCTG AAACGCGCCG GGTACTTCAT CAAGGAATAT
GTTTACCGGA TAGAAGAAGC GGTGATCCGC ACCTTGGTGG AGTTCGGCGT GACCGGGCAC
CGGGTGGCGG GTGCGCCAGG TATTTACGTG CGACTGGATG ACCCGGGCTC GCATGCGTTG
CTGCCGCAGC GGCCGATGAA GTCGGGGCTG GCCAACCCCA GTTTTGGCGG CCTGGGCAAG
ATCGCTGCCC TGGGGCTCAA GGTCAGCCGC AACTGCACTT ACCACGGCGT GGCGTTGAAC
GTGGCGATGG ACCTGGAGCC CTACACGCGT ATCAACCCCT GCGGCTATGC GGGTTTGCAA
ACAGTGGACC TTTCTACAAT CGGCGTTTGC GCTGGCTGGG ATGAGGTCGC GGAGCTGCTG
GGCGACAAGC TCACCCGCTA CCTGGCGCCC TGA
 
Protein sequence
MAMDLLRHRL GRIDYLPAYE AMQVFTAART PETPDELWIC EHPPVYTQGL AGKAEHVFNP 
GTIPVVQTNR GGQVTYHGPG QVVAYPLLDL KRAGYFIKEY VYRIEEAVIR TLVEFGVTGH
RVAGAPGIYV RLDDPGSHAL LPQRPMKSGL ANPSFGGLGK IAALGLKVSR NCTYHGVALN
VAMDLEPYTR INPCGYAGLQ TVDLSTIGVC AGWDEVAELL GDKLTRYLAP