| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3925 |
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| Symbol | gatA |
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| ID | 3961565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4383312 |
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| End bp | 4384793 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918750 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_525155 |
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| Protein GI | 89902684 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACCA CCACTGCACT GCACGACCTC ACCGTGGCCC AGCTCGCCAG CCTGCTGCGC
GCGCGCAAAG TCTCGGCCCT GGAGACGGCC CAGCATTTCT TGGCCCGCGC CCAGGCGAAC
GCGTCGCTCG GGGCTTTTCT GGACTTCAAC GAAGAAGTCA CGCTGCGCCA GGCGCGCGCC
GCTGACCTGG CATTGGCCGC GGACAGCGGC GGTGCCACAC CAACGCTGCT GGGCGTTCCG
ATGGCACACA AGGATATTTT TGTCACGCGC GATTTCATCT CCACCGCGGG CTCCAGGATG
CTGGCCGGCT ATCGCTCGCC GTTTGACGCC ACCGTGGTGA GCAAGCTGGC CGCGCAGGGC
GTGGTGACTT TGGGCAAGCT CAATTGCGAC GAATTCGCCA TGGGCTCGGC GAATGAAAAT
TCGGCGTTTG GCCCGGTCAG GAACCCGTGG GACCTGACCC GCACCCCCGG CGGCTCGTCC
GGCGGCAGCG CGGCAGCCGT GGCCGCGCGG CTGCTGCCCG CCGCCACCGG CACTGACACC
GGCGGTTCGA TTCGGCAACC GGCCTCGTTT TGCGGCGTCA CCGGCATCAA GCCCACGTAC
GGTCGCGCCT CGCGCTACGG CATGGTGGCG TTTGCCTCCA GCCTCGATCA GGCCGGGCCG
ATGGCGCGCA CGGCGCAAGA CTGCGCTTTG CTGCTGTCGG CCATGTGTGG GCCGGACCCG
GACCGTGATT CCACTTCGCT GGACCTGCCG GCCGAAGATT TCACACGGTC TCTCACAGAA
TCCATCGAAG GTTTGCGCAT TGGCGTGCCG GCTGAATTTT TTGGCGAAGG CCTGGCCGAT
GACGTGCGCG CCGCCGTGGA CGGCGCACTC AAGGAACTGG AGAAACTGGG GGCCAGGCTG
GTGCCGATTT CGCTGCCGCG CACCGAGTTG TCCATTCCGG TTTATTACAT CATTGCACCG
GCCGAGGCGT CGAGCAACCT GAGCCGTTTT GACGGCGTCA AGTTTGGTCA CCGGGCCGCG
CAGTACGCGG ACTTGACCGA CATGTACAAG AAGACCCGCG CCGAGGGTTT TGGTGATGAG
GTCAAGCGCC GCATCATGAT TGGCACCTAT GTGCTGAGCC ACGGCTACTA CGATGCCTAC
TACCTGCAAG CGCAAAAGAT CCGTCGCATG ATTGCTGACG ATTTTCAGCA GGCTTATCTG
CAGTGTGACG TGATTGCCGG ACCGGTGGCA CCCACGGTGG CGTGGAAACT GGGCGGGCAC
GGCAACGATC CGCTGGCCGA TTACCTGGCC GACATCTTTA CCCTGCCGGG CTCGCTGGCA
GGTTTGCCGG GCATGAGTTT GCCGGTGGGC TTTGGCGCCA ACCACATGCC GGTCGGGCTG
CAACTGATCG GCAATTATCT GCAGGAGGCG AAATTGCTCA ATGTGGCACA TCGCTTCCAG
CAGGCGACGC ACTGGCACCT TGCCAAGCCA GAAGGATTTT GA
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| Protein sequence | MTTTTALHDL TVAQLASLLR ARKVSALETA QHFLARAQAN ASLGAFLDFN EEVTLRQARA
ADLALAADSG GATPTLLGVP MAHKDIFVTR DFISTAGSRM LAGYRSPFDA TVVSKLAAQG
VVTLGKLNCD EFAMGSANEN SAFGPVRNPW DLTRTPGGSS GGSAAAVAAR LLPAATGTDT
GGSIRQPASF CGVTGIKPTY GRASRYGMVA FASSLDQAGP MARTAQDCAL LLSAMCGPDP
DRDSTSLDLP AEDFTRSLTE SIEGLRIGVP AEFFGEGLAD DVRAAVDGAL KELEKLGARL
VPISLPRTEL SIPVYYIIAP AEASSNLSRF DGVKFGHRAA QYADLTDMYK KTRAEGFGDE
VKRRIMIGTY VLSHGYYDAY YLQAQKIRRM IADDFQQAYL QCDVIAGPVA PTVAWKLGGH
GNDPLADYLA DIFTLPGSLA GLPGMSLPVG FGANHMPVGL QLIGNYLQEA KLLNVAHRFQ
QATHWHLAKP EGF
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