Gene Rfer_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3924 
Symbol 
ID3961564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4382987 
End bp4383286 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content62% 
IMG OID637918749 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_525154 
Protein GI89902683 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTGA CTTCTACTGA CATCGCCCGA ATTGCCAACC TGGCACGGCT GGAGCTCAAA 
GCGGCCGAGA GTGAGCGCAT GCTGACACAA ATCAACGGGT TTTTTGCCCT GGTCGAAAAA
ATGCGCGCGG TCGATACCAC GGGCATTGAG CCGCTGGCGC ACCCGGTGGC CACCGTCCAG
GACATCACCC TGCGCCTGCG TGAAGACCGG GTCAGCGAGC CCAACCAGCG CGAGGCCAAC
CAGCGCAACG CCCCTGCGCT TGAGCATGGC CTGTTTCTGG TGCCCAAGGT GATCGAGTAA
 
Protein sequence
MSLTSTDIAR IANLARLELK AAESERMLTQ INGFFALVEK MRAVDTTGIE PLAHPVATVQ 
DITLRLREDR VSEPNQREAN QRNAPALEHG LFLVPKVIE