Gene Rfer_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3922 
Symbol 
ID3961562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4380804 
End bp4381724 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID637918747 
Productrod shape-determining protein MreC 
Protein accessionYP_525152 
Protein GI89902681 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTTG GTACGCTGGA CGGGACGCCG CCGCCTTTCT TTCGCCAGGG CCCGTCGGCC 
CTGTCCAAAC TCACCTTCTT CAGTCTGCTG GCGCTGTTCC TGATGGTGGC CGATGCGCGC
CTTGAGCTGG CGCGGCCGTT GCGGGTGGCG GTGGCGGCCG CGCTCTATCC GATGCAATGG
CTGGCCCTGC GGCCCGTGGT CTGGGTCCAG GGTGGCGGCA AATATTTTGA GTCTCTCAAA
CGCTCCCAGA GCAGCGAAGA AGCCGCCCTG TACAAGCTCG GTTTGCAGTC CCAGCGTGCC
AGTCAGGTCG AGCAACTGCT GTTGGAAAAC ACCCGCTTGC GCGCGCTGCT GACGTTGCGC
GAGCGCGTGG CCACGCCATC ACAGGCGGCA CAAGTCCTGT ATGACGCCGC CGACCCCTAC
ACCCGCAAAG TCATCATTGA CCGCGGCTTG CTCGACGGCG TCGCGGCCGG CTCGCCGGTG
CTGGACGAAG CCGGCGTGTT GGGCCAGGTG ACACGGGTCT ATCCGGCGAT CAGCGAAGTC
ACGCTGATCA CCGACCGGGA GCAGGCCATT CCGGTGCTCA ACACCCGCAC CGGGGCGCGC
GGCGTGGCCT TTGGCGACCC GGCCCTGCGC GCCAACGCGC TGGAGCTGCG TTTCATGGCG
GCCAATACCG ATGTGCAAGT CGGTGATTTG TTGACCACCA GCGGCGTGGA CGGCGTCTAC
CCCCCGGGTT TGCCGGTCGC GAAGGTGGCG AAGGTCGATC GCCGTGCTGA CTCGGCATTT
GCGCGCATCA GCTGTGAGCC CCTGGCGCTG GTGTCAGGCG TGGTGCATGT GATGGTGCTG
CAGCCCGTTG CCAGCCAGAT CGCCTCGCGG CCGGTCGTGC CGGCAAGCGC CGGCCCGGTC
AGGAAAGGAT CGAAAAAATG A
 
Protein sequence
MPLGTLDGTP PPFFRQGPSA LSKLTFFSLL ALFLMVADAR LELARPLRVA VAAALYPMQW 
LALRPVVWVQ GGGKYFESLK RSQSSEEAAL YKLGLQSQRA SQVEQLLLEN TRLRALLTLR
ERVATPSQAA QVLYDAADPY TRKVIIDRGL LDGVAAGSPV LDEAGVLGQV TRVYPAISEV
TLITDREQAI PVLNTRTGAR GVAFGDPALR ANALELRFMA ANTDVQVGDL LTTSGVDGVY
PPGLPVAKVA KVDRRADSAF ARISCEPLAL VSGVVHVMVL QPVASQIASR PVVPASAGPV
RKGSKK