| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3904 |
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| Symbol | |
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| ID | 3961544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4361457 |
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| End bp | 4362341 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637918729 |
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| Product | CRISPR-associated Csh2 family protein |
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| Protein accession | YP_525134 |
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| Protein GI | 89902663 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC TGCAGAACAA AATTGATTTC GCGGTGATTC TTCGCGTAAA GAACGCCAAC
CCAAATGGCG ACCCGCTCAA CGGCAATCGT CCCCGCACAG ACTATTCGAA CTTCGGCGAA
ATGACCGATG TTTCCATCAA ACGGAAGATT CGTGACCGAT TGCTTGAACG CTGGGTTGCA
GCGGGGAAGG CAGACGATGG CAACATGATT TTTGTGCAGT CTGATGATCG CAAAGCCGAT
GAGTACAAAA GCCTGCGTGC CCGTGCCGAA GCTGTACTTG GCAAAGCGTT GGGCTCTGAT
CAAACTGCGT TATTGGCATG TTCGAAGTGG CTGGATGTGC GAGCGTTCGG GCAATTGTTT
GCGTTGAAGA GCAACAAAAA GGCAGGTAAG AAAAACGATG ATGGCAGTGA TGACGAGGGG
GATACTGGAG TCTCTATAGG CATTCGTGGC CCTGTCACGG TGCAATCGGC ATTCAGCGTG
GAGCCCATTG ATATCACCAG TACACAAATC ACGAAAAGTG TGAGTGGCGA AGGTGATGGC
ACCAAACGCA GTTCTGACAC GATGGGAACG AAGCATCGTG TAGATCAAGG CATCTACCGA
TTTTTTGGAA GCATGAATCC ACAACTTGCA GAGAAAACAG GGTTTTCAGA CGCAGATGCT
CAGGCCTTGA AAGCTGTTTT GCCAAAGCTA TTTGAAAACG ATGAATCTTC GGCACGCCCA
GCAGGCAGCA TGGAAGTAGT GAAAGTGATT TGGTGGCAAC ACAACTGCAA GTCTGGACAG
TATTCATCAG CCAAGGTGCA TCGAAGCTTG ACTGTCAACC CTGATGGTAG CTACAGCATC
GACTCTCTCG ATGGATTGGT GCCAGAGTGT TTGGACGGGT TTTAA
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| Protein sequence | MTTLQNKIDF AVILRVKNAN PNGDPLNGNR PRTDYSNFGE MTDVSIKRKI RDRLLERWVA
AGKADDGNMI FVQSDDRKAD EYKSLRARAE AVLGKALGSD QTALLACSKW LDVRAFGQLF
ALKSNKKAGK KNDDGSDDEG DTGVSIGIRG PVTVQSAFSV EPIDITSTQI TKSVSGEGDG
TKRSSDTMGT KHRVDQGIYR FFGSMNPQLA EKTGFSDADA QALKAVLPKL FENDESSARP
AGSMEVVKVI WWQHNCKSGQ YSSAKVHRSL TVNPDGSYSI DSLDGLVPEC LDGF
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