| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3901 |
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| Symbol | |
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| ID | 3961522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4356346 |
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| End bp | 4358823 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637918726 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_525131 |
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| Protein GI | 89902660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAAAAC ACATTGCCCA CGTACGAAAG GCTGACGGAG CTATTCAGCT ACTGCCCGAC
CATTTAAGGG GCGTTGCACG GTTGACCAGT GAGTTCGCTA GCAAAATTGG TTTGCCTCAG
CAAGGCGAAC TCATTGGCTT GCTGCACGAT TTGGGGAAGT ACAGCGCAGA GTTCCAAAAT
TATCTGAAAT CTGCTGTTGA GTTGCTGAAC CCGGATGAAG ATGAGTTTGT CGATGCCAAA
GGGCTCAAGG GAAAAGTTGA CCATTCCACA GCCGGCGCAC AACTGGTGTG GCAAGAACTC
GCTAAGTTTG GGCAACTCGG ACAGATCGTT GCTCAGATAT TGGCGCTGTG TATTGCTTCG
CATCACTCAG GACTAATCGA CTGTTTAAGC GCTGACGAAA ACAGTCTTGG GGATGACTCG
TTTAGCAAAC GAATGAACAA GCAGGACGGA CGAAGCCATT TAGATGAAGC ACAGACCGTC
GCCGATGACC TTGTTCTGCT GCGCGCTCAC GCGCTTATGG CAGAGCCTTC AATGATTCAT
GCAATACAGA GCCTTGTTGG CAAGATCATT CGGCTCTCTC CAGAAAAAAA TGATCGCAAC
ATCGTGACGC AACAGCACAT CGGTTTACTG GTGCGGTTTT TGTTCAGCTG CTTGATCGAC
GCTGATCGTA TCGATACCGC AGATTTTGAA AACCCCAGAC AGGCCAAATT GCGTATGGGT
GGACGCTATG CCGATTGGGA TACTTTGTGC TTCCGCCTTG AAGCGCATCT GGCTAACTTC
ACTCCCCGTT ATCCCATTGA CCAACTTCGT CAGGATATTT CGCAGCACTG CTTCAATGCT
GCCAAGCGTC GTCGCGGCAT CTTTACTCTG ACAGTGCCTA CGGGTGGCGG CAAAACACTG
GCGAGTCTAA GGTTTGCGCT ACATCATGCC AAGACACACC AGATGGAACG CGTGATTTAT
GTCATTCCAT TTACATCCAT CATTGACCAA AATGCGGATG TGGTTCGGCG TATTCTGGAA
CCACAAGGTG TTGTGCCCGG AACCGTGGTA CTAGAACACC ATTCCAATTT GACTCCCGAA
TCACAAACTT GGCGCAGCAA AATGCTCTCT GAAAACTGGG ATGCGCCAGT GGTTTACACC
ACCAGCGTTC AGTTTCTGGA AACCTTGTTT GGTTCGGGTA CCCGAGGTGC CCGGCGCATG
CACCAACTGG CCAACGCTGT GTTGATCTTT GATGAAATTC AGACGTTGCC GGTCAATTGT
GTTCATCTGT TTAACAACGC GATCAGTTTT TTAACCAAGC ATTGCAACAG CACGGTGGTT
CTATGCACCG CAACACAACC TTTGCTGGAC AAGGTGGATG CCTTCAAGGG TGCAATGCAG
TTAGCCGATG ATCACGAGAT CATGCCCGAT GTGCAGGGCT TGTTTGATGA CCTAAAACGG
GTCGAAGTCA AGAACCAACT CAGACACGGC GGTTGGTCGG CAGATGACAT TGCTGCACTG
GCGTTGAGTG AGGTGGAAAG GGCGCAGAGC TGTCTGGTCA TTGTCAACAC AAAAATCGCT
GCACAAGCCA TTTACCGTCA ATGCAAACAG CGTGCTGAAT TCAAGGTCTA TCACCTCAGC
ACCCACATGT GCCCCGCCCA CCGCAAGGTC ATATTGACGC AAGTTCGCGA TGACTTGCAA
GTACAAACGC CAACGTTATG CATTAGCACC CAGTTGATCG AGGCCGGTGT GGATGTTGAT
TTTGGTTGTG TCATCCGCTT CACTGCCGGT CTGGATTCGA TTGCACAAGC TGCAGGGCGC
TGCAATCGCA ATGGTCGACA AGATTGCGGG ATTGTCCATG TCATTAACCC GCAAGACGAA
AACTTGAACA TGCTCCCCGA TATTCGGATT GGTCGAGACA GGGCAGAACG TGTGATGAGC
GACTTTCACG AAAATCCCGG CAAGTTCGGC AACAACCTGA TTGGACCTCA GGCGTTGGCT
TGGTATTACC AAAACTACTT TTACGCCAGA TCTGACGAGA TGACCTATCC GGTTTCTGAA
AAAAAACTGG GCCATCACGA CAGTTTGTTG AATTTGCTGT CCTGCAACAC GATCGCTTCG
GCAGAACATT CCAAAGCCGC AGGAAGGGCC CCTGACATTT ATCTCCGGCA ATCGTTCATG
GCGGCCGCCC GTGCGTTTAA AGCCATCGAT GCGCCAACTC GGGGGGTGCT GGTGCCCTTT
GAGCAGGCGG GACGGGATTT GATTGCCGAT TTGTGCAGTG CCTACATGCC AGACAAAGAA
TTTGACTTAT TGCGAAAAGC CCAGCAGTAC AGCGTGAACG TTTTCCCCAA CGTCTTGGAA
AAGCTGCAAA AGGCTGGTGT TGTTCGCGAA GTCAGGCCTG ACACCGATAT TTTGTTTTTG
ATCGACTCGC GCTACTACAG CACAGAGTTT GGGCTTGCAA CAACACCCGA AGGGAATATG
GAGGTTCTTT ATGGTTAA
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| Protein sequence | MSKHIAHVRK ADGAIQLLPD HLRGVARLTS EFASKIGLPQ QGELIGLLHD LGKYSAEFQN
YLKSAVELLN PDEDEFVDAK GLKGKVDHST AGAQLVWQEL AKFGQLGQIV AQILALCIAS
HHSGLIDCLS ADENSLGDDS FSKRMNKQDG RSHLDEAQTV ADDLVLLRAH ALMAEPSMIH
AIQSLVGKII RLSPEKNDRN IVTQQHIGLL VRFLFSCLID ADRIDTADFE NPRQAKLRMG
GRYADWDTLC FRLEAHLANF TPRYPIDQLR QDISQHCFNA AKRRRGIFTL TVPTGGGKTL
ASLRFALHHA KTHQMERVIY VIPFTSIIDQ NADVVRRILE PQGVVPGTVV LEHHSNLTPE
SQTWRSKMLS ENWDAPVVYT TSVQFLETLF GSGTRGARRM HQLANAVLIF DEIQTLPVNC
VHLFNNAISF LTKHCNSTVV LCTATQPLLD KVDAFKGAMQ LADDHEIMPD VQGLFDDLKR
VEVKNQLRHG GWSADDIAAL ALSEVERAQS CLVIVNTKIA AQAIYRQCKQ RAEFKVYHLS
THMCPAHRKV ILTQVRDDLQ VQTPTLCIST QLIEAGVDVD FGCVIRFTAG LDSIAQAAGR
CNRNGRQDCG IVHVINPQDE NLNMLPDIRI GRDRAERVMS DFHENPGKFG NNLIGPQALA
WYYQNYFYAR SDEMTYPVSE KKLGHHDSLL NLLSCNTIAS AEHSKAAGRA PDIYLRQSFM
AAARAFKAID APTRGVLVPF EQAGRDLIAD LCSAYMPDKE FDLLRKAQQY SVNVFPNVLE
KLQKAGVVRE VRPDTDILFL IDSRYYSTEF GLATTPEGNM EVLYG
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