| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3888 |
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| Symbol | |
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| ID | 3961509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4338463 |
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| End bp | 4340019 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918713 |
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| Product | D-lysine 5,6-aminomutase alpha subunit |
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| Protein accession | YP_525118 |
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| Protein GI | 89902647 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAT TGCATTTGGA TCAGGCGCAG ATTGACCGCG CGCGTGACTC GGCGCGGCGT
ATTGCGCGCC AGGTGTTTGA CGACATGGCC CCGTTCACCA CGACCACCGT GGAGCGCGCC
ACGCTGCGCC TGCTCGGTGT TGATGGCGTG GACGAAAACG ACATCCCCCT GCCCAACCGC
GTGGTCAGCC ATTTGCAGGC GCAAAATCTG CTGCAGCACG GTGCCGCCAT TATTCTGGCG
GGTGCCATGC AGGAAACGGG TCGGAGTGCC CAGCAAGTGG CCCAGGCGGT GTCCTCGGGC
ACCCTCACAC TGAGCTACCC CAAGAACGAG GCAGCCGCGC GCCACGCCGC TGACGCGTGC
GCCGCCACGG TGTGCCAACA CATTGCCGGG CAACGCGCGC ACCGCGACGA TCAGATCAAA
ACCCTGGGAG AAGGCAAAAC CCCCTGGCTG TACCTGATTG TGGCCACCGG CAATATTCAT
GAAGACGTGG TGCAAGCCCG CGCCGCGGCC GAGCAGGGCG CCGACATCAT TGCCGTGATC
CGCTCCACCG GCCAGAGCCT GCTCGACTAT GTGCCCTTTG GCGCCACCAC CGAAGGTTTT
GGCGGCACTT ACGCCACGCA GGAAAACTTC CGGCTGATGC GCGCCGCGCT GGATGAAGTG
GGCCAAAAGG TGGGCCGCTA CATCCGCCTG ACCAACTACT GCTCGGGCCT GTGCATGCCA
GAGATTGCCG CCATGGGCGC CTTGGAGCGG CTCGACATGA TGCTCAACGA CTCGATGTAC
GGCATCATCT TTCGCGACAT CAACATGCAG CGCACCTTCA TTGACCAGTT CTTCTCGCGC
ATGGTCAATG CCTACGCCGG CATCATCATC AATACCGGTG AAGACAACTA CCTCACCACC
GCCGACGCTT TCGATGCCGC GCACACTGTG CTGGCCTCGC AGCTGATCAA CGAACAGTTT
GCCACCCTGT CGGGCCTTGG CCCCAAGCAA ATGGGATTGG GCCATGCGTT TGAGATTCAT
CCTGAGCTGG AAAACGGCTT CTTGTGGGAA CTGGCCCACG CGCAACTGGT GCGCCAGGTG
TTTCCCGATG CCACGCTCAA GTACATGCCG CCCACGAAGT ACATGACGGG CAACATTTTC
AAGGGCCATG TGCAGGACGC CTTGTTCAAC ATGGTGAGCG TGTTGACACA GCAAAACATC
CACTTGACTG GCATGATGAC CGAGGCCATC CATACGCCGT TTATCCAGGA TCGCTTCCTG
GCGATCCAGA ACGCCAAGTA CGTGTTTGGC ACCATGAAAG ACCTGCACGC CGAGATTGAA
TTCAAGCGCG GCGGCAAGAT TGAGCAGCGC GCCCAGGCGG TGCTGGCAGA AGCCGAGGCC
ATGCTGGCGC AGATTGAGGC CATGGGCCTG GCCGGAGCGA TCGGCAAAGG CATGTTTGCC
GAGATTTCGC GCACGCCCAC GGGCGGCAAA GGGCTCGATG GCGTGATCCA GAAGGCCGGC
AACTATTACA ACCCGTTCCC CCACCTGATG TTGCCTGGAG AAAATCAACA TGCTTGA
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| Protein sequence | MTQLHLDQAQ IDRARDSARR IARQVFDDMA PFTTTTVERA TLRLLGVDGV DENDIPLPNR
VVSHLQAQNL LQHGAAIILA GAMQETGRSA QQVAQAVSSG TLTLSYPKNE AAARHAADAC
AATVCQHIAG QRAHRDDQIK TLGEGKTPWL YLIVATGNIH EDVVQARAAA EQGADIIAVI
RSTGQSLLDY VPFGATTEGF GGTYATQENF RLMRAALDEV GQKVGRYIRL TNYCSGLCMP
EIAAMGALER LDMMLNDSMY GIIFRDINMQ RTFIDQFFSR MVNAYAGIII NTGEDNYLTT
ADAFDAAHTV LASQLINEQF ATLSGLGPKQ MGLGHAFEIH PELENGFLWE LAHAQLVRQV
FPDATLKYMP PTKYMTGNIF KGHVQDALFN MVSVLTQQNI HLTGMMTEAI HTPFIQDRFL
AIQNAKYVFG TMKDLHAEIE FKRGGKIEQR AQAVLAEAEA MLAQIEAMGL AGAIGKGMFA
EISRTPTGGK GLDGVIQKAG NYYNPFPHLM LPGENQHA
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