| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3883 |
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| Symbol | |
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| ID | 3961504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4334157 |
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| End bp | 4335266 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918708 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_525113 |
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| Protein GI | 89902642 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATC CCACCCTGCT TCAAACCCCG ACTCAAACCC AATTTTTCAG CGTCCAGGAT
GTGGCCAACC TGGTCTCCCA AGTGGGTATC GCCGCCACCT TGACCCGCCT GGCTGACTAC
ATCCTGGATG ACTACCGGCG CTGGCAAGAC TTTGACAAAT GCGCCCGCGT GGCCAGCCAT
TCGCTTGACG GCGTGATTGA ACTGATGCCG ATTGCCGATG CCAAGACCTA TGCCTTCAAA
TATGTTAATG GCCACCCCAA AAACACGCGC CTGGGCCTGC CCACGGTGAT GGCGTTTGGC
GTGCTGGCCG ATGTGGCCAC CGGCATCCCC ATGGTGCTCA GTGAGCTGAC CCTGAGCACG
GCGCTGCGCA CGGCCGCCAT GTCGGTCGTC GCCGCCCGCG CACTGGCCCG ACCCAACAGC
AAGTGCATGG CACTGATCGG CAACGGAGCG CAGGCTGAGT TTCAGGCGCT GGCGTTTCAT
CACCTGCTGG GTATTGAAGA AATCCGGCTG TTTGATACCG ATGCCCTGGC CAGCCGCAAA
CTCATGCGCA ACCTGCAGCA CACCGGTCTG CGCCTGAGCG CCTGCACCAG CATTGCGCAG
GCCGTGCGCG GCGCTGACAT TGTGACCACC GTGACGGCCG ACAAAACCAA TGCCACCATT
CTCACGCCCG AGCTGATGGA GCCGGGCATG CACATCAACG GCGTCGGCGG CGACTGCCCC
GGCAAGACCG AGCTGCATCC GGATGTGCTG CGCGGGTCTG CGGTGTTTGT GCAGTACGAG
CCGCAAACCC GCATCGAAGG CGATTTGCAG CAGATGCCAG CCGATTTTGC GGTAACCGAA
CTCTGGCGGG TGCTGCGCGG CGAGGCGCCG GGGCGTACTT CTGACGGACA AATCACGCTA
TTTGACTCGG TCGGCTTTGC GCTGGAAGAC TACTCGGCCC TGCGCTACCT GCGTGATACA
GCCTTTGAGT TGGGTCTGGG ACAACGGCTT TTATTGCTGC CCGAGCTAGC CAACCCGAAA
GACCTGTTCA GCCTGATTCG CCCCGCTTCA CGCGGCCAGG CAGATGCAGC GCGTCGGGAT
GCCGAACCCG CGTTAGCATC GGCCGCATGA
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| Protein sequence | MKHPTLLQTP TQTQFFSVQD VANLVSQVGI AATLTRLADY ILDDYRRWQD FDKCARVASH
SLDGVIELMP IADAKTYAFK YVNGHPKNTR LGLPTVMAFG VLADVATGIP MVLSELTLST
ALRTAAMSVV AARALARPNS KCMALIGNGA QAEFQALAFH HLLGIEEIRL FDTDALASRK
LMRNLQHTGL RLSACTSIAQ AVRGADIVTT VTADKTNATI LTPELMEPGM HINGVGGDCP
GKTELHPDVL RGSAVFVQYE PQTRIEGDLQ QMPADFAVTE LWRVLRGEAP GRTSDGQITL
FDSVGFALED YSALRYLRDT AFELGLGQRL LLLPELANPK DLFSLIRPAS RGQADAARRD
AEPALASAA
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