Gene Rfer_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3880 
Symbol 
ID3961482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4331325 
End bp4332506 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content63% 
IMG OID637918705 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_525110 
Protein GI89902639 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.356419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACG ATTTTCTCTT TACCTCCGAG TCCGTATCAG AAGGACACCC CGACAAGGTG 
GCTGACCAGA TTTCAGACGC CATCCTCGAC GCGATCTTCA AGCAGGACCC CAAGTCCCGC
GTCGCGGCCG AAACCCTGTG CAACACCGGC TTGGTGGTGC TGGCCGGTGA AATCACCACC
AACGCGCATG TGGACTACAT CCAGGTGGCG CGCGACACGC TCAAGCGCAT CGGCTACGAC
AACACCGAGT ACGGCATCGA CTACAAAGGC TGCGCCGTGC TGGTGGCCTA TGACAAGCAG
AGCAACGACA TCGCCCAGGG CGTGGACCAT GCCTCAGACG ACCACCTGAA CACCGGTGCC
GGCGACCAGG GCCTGATGTT CGGCTACGCC TGCAACGAGA CGCCCGAACT GATGCCAGCG
CCGATCTACT ACGCCCACCG GCTGGTGGAG CGCCAGGCGC AATTGCGCAA AGACGGCCGT
CTGCCGTTTC TGCGACCCGA CGCCAAGAGC CAGATCACCA TGCACTACGT GGACGGCAAG
CCGCATTCCA TCGACACGGT GGTGCTGTCG AGCCAGCACA GCCCGGAGAT GAGCAACGGC
CTGACGATGA AACCGGCCTT CATTGAAGCC GTGATGGAAG ACATCATCAA ACCCGTTTGC
CCGAAGGAAT GGCTGACGGC GGACACCAAG TACCTGATCA ACCCGACCGG CCGCTTCGTG
GTCGGTGGCC CGCAAGGCGA CTGCGGCCTG ACCGGACGCA AGATCATTGT GGACACCTAC
GGCGGCGCCT GCCCGCACGG CGGTGGCGCC TTCAGCGGCA AAGACCCCAG CAAAGTGGAT
CGCTCCGCCG CTTATGCGGC GCGTTATGTG GCCAAAAACA TTGTGGCGGC CGGCCTGGCG
CGCCAGTGCC AGATTCAGGT CGCCTACGCC ATCGGTGTCG CCAAGCCCAT GAACGTGACG
GTGTACACCG AAGGCACCGG CGTGATCCCG GACGACAAGA TCGCGGAACT GGTGCATGAG
CTCTTTGACC TGCGCCCCAA AGGCATCATC CAGATGCTGG ACCTCTTGCG CCCGATCTAT
GAAAAGACCG CCGCCTACGG CCACTTTGGT CGTGAAGAGC CCGAGTTCAC CTGGGAGCGC
ACCGACAAAG CGCAGGCACT GCGGGCAGCG GCGGGGCTAT AA
 
Protein sequence
MANDFLFTSE SVSEGHPDKV ADQISDAILD AIFKQDPKSR VAAETLCNTG LVVLAGEITT 
NAHVDYIQVA RDTLKRIGYD NTEYGIDYKG CAVLVAYDKQ SNDIAQGVDH ASDDHLNTGA
GDQGLMFGYA CNETPELMPA PIYYAHRLVE RQAQLRKDGR LPFLRPDAKS QITMHYVDGK
PHSIDTVVLS SQHSPEMSNG LTMKPAFIEA VMEDIIKPVC PKEWLTADTK YLINPTGRFV
VGGPQGDCGL TGRKIIVDTY GGACPHGGGA FSGKDPSKVD RSAAYAARYV AKNIVAAGLA
RQCQIQVAYA IGVAKPMNVT VYTEGTGVIP DDKIAELVHE LFDLRPKGII QMLDLLRPIY
EKTAAYGHFG REEPEFTWER TDKAQALRAA AGL