Gene Rfer_3874 details

Gene Information

• Locus tag: Rfer_3874
• ID: 3961476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4326055
• End bp: 4326648
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637918699
• Product: phosphoheptose isomerase
• Protein accession: YP_525104
• Protein GI: 89902633
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAGC AACGTATTCA ACAACACTTT ATCGACAGCG CTGACCTGAA ATACCAGGCC 
GCGCCCATTT TGAGCAAACC GATTGCCGCC GCCGTGCAGG CGCTGCTGGC CTGCGTCACC 
AGCGGTGGCA AAGTGCTGGC CTGCGGCAAC GGCGGCTCGG CGGCGGATGC GCAGCATTTC 
TCTGCCGAAT TTGTCGGGCG CTTTGAGCGC GAACGCCCGG AGCTGGCGGC TATTGCGCTG 
ACCACCGACA GCTCCATCCT CACGGCGATT GCCAACGATT ACGACTTCAG CGTGATTTTT 
TCGCGCCAGG TGCGCGCCCT GGGGCAACCC GGCGACGTGT TGCTGGCTAT TTCAACCAGC 
GGTAATTCAG CCAATGTGCT GGCCGCCATT GAGGCCGCGC ACGAGCGCGA AATGGTGGTG 
GTGGGCTTGA CCGGACACGG TGGCGGCAAA ATGAGCCACG CCCTGCGCGA TACCGATGTG 
CACATTTGTG TGCCCCACGA CCGCACCGCG CGCATTCAGG AAGTCCACAT TCTGGCGCTG 
CATTGCATTT GCGACGCAGT GGACGCGCAG CTACTTGGAG ATCAGGAAAC ATGA 

 

Protein sequence

MLEQRIQQHF IDSADLKYQA APILSKPIAA AVQALLACVT SGGKVLACGN GGSAADAQHF 
SAEFVGRFER ERPELAAIAL TTDSSILTAI ANDYDFSVIF SRQVRALGQP GDVLLAISTS 
GNSANVLAAI EAAHEREMVV VGLTGHGGGK MSHALRDTDV HICVPHDRTA RIQEVHILAL 
HCICDAVDAQ LLGDQET