Gene Rfer_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3873 
Symbol 
ID3961475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4325632 
End bp4326018 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content62% 
IMG OID637918698 
Producthypothetical protein 
Protein accessionYP_525103 
Protein GI89902632 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC CTCAAATCAA GACCCAGGTC GGCACCAGCA AACAAGCAGG CGATGCAGCC 
GAAGAGTCCG CACTGCGCCA TCTGCAGCAG GCGGGTCTGC GCCTGCTGCA GCGCAATTAT
CGGACGCCAG GGCGCGGGGG CGGAGAAATT GACCTGATCA TGCGCGCGCC GGATGGCACG
ACGGTGTTTG TCGAGGTGCG TCAACGCGCC AACGCCAGCC ATGGCGGGGC TGCGGCCAGC
ATCAGCGTCA CCAAGCAGCG GCGCATTATT TTTGCGGCGC GTCATTATTT GATGCGCTTG
CGCGAGCCGC CGCCCTGCCG CTTTGATGTG GTGACGCTGG AGTGCGGTGT CATTCAATGG
TTGCAAGCGG CCTTTGAGGC CTGTTAA
 
Protein sequence
MAIPQIKTQV GTSKQAGDAA EESALRHLQQ AGLRLLQRNY RTPGRGGGEI DLIMRAPDGT 
TVFVEVRQRA NASHGGAAAS ISVTKQRRII FAARHYLMRL REPPPCRFDV VTLECGVIQW
LQAAFEAC