Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3868 |
Symbol | |
ID | 3961470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4319084 |
End bp | 4322740 |
Gene Length | 3657 bp |
Protein Length | 1218 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918693 |
Product | indolepyruvate ferredoxin oxidoreductase |
Protein accession | YP_525098 |
Protein GI | 89902627 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCCT CATTGCCCGA CCTTCTACCC CAAGCGCTGG CCAGTGCCAC GCTGGACGAC AAATATGCGC TGGACAAAGG TCGTGCCTTC ATGAGTGGCG TGCAAGCCCT GGTCAAACTG CCGATGTTGC AGCAGGCGCG TGACCAACTG CTTGGCAAAA ACACGGCTGG GTTTATCAGC GGCTACCGCG GTTCGCCGCT GGGCAATTAC GACCAGGCAC TGGTCAAGGC GGAGAAACAC CTCAAGGCGA AGAGCATCGT TTTCCAGCCT GGTGTTAATG AAGAACTGGC CGCCACCGCC TTGTGGGGCA CCCAGCAGCT CGGTTTCGCA CCGCCCGGCT CCAACAAGTT TGATGGTGTG TTTGGCATCT GGTACGGCAA GGGCCCGGGC GTGGACCGCT GTGGCGACGT CTTCAAGCAC GCCAATATGG CGGGCACCAC GCCGTGGGGC GGCGTGATCG CCGTGGCGGG CGACGACCAC ATCTCGAAAA GCTCGACCGC AGCGCACCAG AGCGACCATA TTTTCAAGGC CTGCGGTACG CCGGTGTTTT TTCCGGCCAG CGTGCAGGAG ATTCTCGATC TGGGTCTGCA TGCCTTTGCC CTGAGTCGTT TTTCCGGGGT CTGGGCCGGC ATGAAGACGA TTCAGGAGGT CGTCGAATCC AGCGCTACCG TGATCATTGA TCCGAACCGG GTGCGGATCA AAATTCCGAC CGATTTCGAG ATGCCGCCGG GCGGTGTGCA CATTCGCTGG CCCGATGCAG CCCTGGCGCA GGAGGCGCGC CTGTTTGACT TCAAGTGGTA CGCGGCGCTG GCCTATGTCC GGGCCAACCG GCTCAACTAC AACGTGATCG AGGGCCCGAA TGACCGTTTT GGCCTGATTG CCAGCGGCAA GGCCTTCAAC GACACGCGCC AGGCTTTGCT CGATCTGGGG CTGGACGATG CGACCTGCCA GCGTTTGGGC ATCCGTTTGC ACAAGGTCGG CGTGGTGTGG CCGCTGGAAG CCCAGCTGAC GCGCGAATTT GCCACCGGCC TGCAGGAAAT TCTGGTGGTG GAAGAAAAGC GCCAGATCAT TGAGTACCAG CTGAAGGAAG AGCTGTACAA CTGGCGTGCT GACGTTCGGC CCACCGTGCT GGGCAAGTTC AACGAGGTTG ACAGCGGCTC GGCAGGCTCC CACTATGGCA GCGGTGGCGA GTGGTCGATG CCGAACCCGA GTGCCAATAC GCTGTTGCGC GCCAATGCCG ACTTGTCGCC CGCCCTCATT GCCCGGGCCA TCGCCCAGCG CTTGAAGAAA ATGGGCCTGG ACGCCGACAC GACGGCGCGC ATCGACGCCC GACTGGCTAT TCTGCAGGCC AAGGAGCAGG CCATGCAGAT GCTTGAAGTG AGCAGCGTCA AGGGGGCCGA GCGCCAACCC TGGTTCTGCT CCGGCTGCCC GCACAACACC TCGACCAAAG TCCCCGAGGG CTCGCGTGCC ATGGCCGGCA TTGGCTGCCA CTTCATGGCG ATCTGGATGG ACCGTGCCAC CGTGGGCTTT ACCCAGATGG GTGGCGAGGG TGTGCCCTGG GTCGGCCAGC AGCCCTTCAG CACCGAACAG CACGTGTTTG CCAACCTGGG CGATGGCACC TACTTTCACA GCGGGCTGAT GGCGATTCGC CAGGCTATCG CGGCGGGCGT GAACATCACC TACAAGATTT TGTACAACGA CGCGGTTGCC ATGACCGGTG GCCAGCAAAT TGGCGAGCGC CCGGAAGGAC ACTCCGTGGT GCAGATTGCC CAGAGCATGC GGGCCGAAGG TGCTATCAAA ATAGTGGTGG TGACGGACGA ACCGGACAAG TACGCCCACA TCACCGGCTT GCCCGAGGGC ATTGCCGTTG AACACCGCGA CGAACTCGAT CGCCTCCAGC GCGAGTTCCG GGAAATCAAG GGCACCACTG TCATCATCTA TGACCAGACC TGTGCCACCG AAAAACGGCG CCGGCGCAAG CGTGGCAGTC TGGTCGATCC GGCCAAACGG GTTGTCATCA ATGAATTGGT GTGTGAGGGT TGTGGCGACT GCGGCGTGCA GAGCAACTGT CTGAGCGTGG AGCCGCTGGA GACCGAGTTT GGCCGCAAGC GCCAGATTAA CCAAAGTACT TGCAACAAGG ACTATTCGTG CGTCAAGGGG TTTTGCCCGA GTTTTGTCAC GGTAGAGGGC GGTCAGCTCA GAAAGAAATC AAAGGGCCAG GGACCGTCAC CGTTTGATGC GGCATGGGGC GCGTTGCCGG AGCCGACGAT GGCTTCGACG ATCGGCCAGC AAAGCCAGGT GTGGGGCATT GTCGTCGCCG GTGTCGGCGG CACCGGCGTC ATCACCATTG GCCAGTTGCT GGGCATGGCG GCGCATCTGG AGGGCAAGGG CATCGTGACG CAAGATGCGG GCGGCCTGGC GCAAAAAGGC GGCGCCACCT GGAGCCACGT GCTGATCGGC GCCTCACAAG ACGCCATCCG CACCACGCGC GTGGGCATGG CGGGGGCCGA CCTCATCATC GGCTGCGACC CCGTTGTGGC GGCCAGCACG GAAACCCTGC TGCGCATGCT CAGGGGGCGC ACGCAGGTGG CGCTGAACTC CCACGCCACG CCAACGGCCG CTTTTGTCAA AAACGCCAAC TGGCAAAACC CGGCCGAGGC CTGCGTCAGC GACATCGTCA AAACAGTGGG ACTCGATGCG GTGGCCGCAT TCAACACGGA GCTCGCGGCC ACCCGTCTGA TGGGCGACAG CATTTACACC AACCCGATGC TGCTCGGCTT TGCCTGGCAA AAGGGGTGGA TTCCGCTGCA GCAAGCCTCG CTGCTGCGCG CCATCGAGCT CAATGCGGTG GCGGTCGAGC AAAACAAGAC CGCGTTTACA TGGGGCCGCC GCGCGGCGCA CGATCCTGCT GCGGTTGACG AGCTGCTCAA CCCGGGGCAA GTGGTGACTC TTGCCAAGCG CAGTTCACTC GATGAGTTGA TTGCCAAACG GGTTGTGTTT CTGACGGCGT ACCAGAATGG CGCTTACGCT GAACGCTACA AATCCTTTGT GCAGAAGGTG AAAAGTGTGG ATGAGTCGGT CGGCCCCAGG AGCCTGGCTC TGAGCGAGGC GGTGGCGCGC TACCTGTTCA AGTTGATGGC CTACAAAGAT GAGTATGAGG TGGCGCGTTT GCATAGCCAC AGCGATTTCA ACGCCAGGAT AGCCGCCTTG TTTGAAGGTG ATTTCAAGAT TCACTACCAC TTGGCGCCCC CCTTGCTGGC CAAAAAGAAT ACGCGCGGCG AGTTGCAAAA GCGGCCCTAC GGCCCCGCCA CGTTGCTGGC CTTCAAGGTG CTGGCTCAGT TCAAGGGCCT GCGCGGCACG GCGCTGGATA TTTTTGGCAA GACCGAGGAG CGTCGCCAGG AGCGCGCCCT GATCACCGAG TACCAGGCCA GCATCAATGA GTTGCTTGAC GTGCTGGGCC GCAACCAGTC AGGGGGGCAG TCGGGTGAAG GCGAGCAGAC GCATTACCAG CTGGCACTGG ACATTGCCCG TATTCCGGAG CAGATCCGGG GGTTTGGACA CATCAAGGCG CGCCATCTGA GCGCGGCGCG TCAAAATTGG CAAGAGTTGA TGACCCGGTT TCGGGGCTTC GTGGCCCCGC ATACAATGCC CGGTTGA
|
Protein sequence | MNASLPDLLP QALASATLDD KYALDKGRAF MSGVQALVKL PMLQQARDQL LGKNTAGFIS GYRGSPLGNY DQALVKAEKH LKAKSIVFQP GVNEELAATA LWGTQQLGFA PPGSNKFDGV FGIWYGKGPG VDRCGDVFKH ANMAGTTPWG GVIAVAGDDH ISKSSTAAHQ SDHIFKACGT PVFFPASVQE ILDLGLHAFA LSRFSGVWAG MKTIQEVVES SATVIIDPNR VRIKIPTDFE MPPGGVHIRW PDAALAQEAR LFDFKWYAAL AYVRANRLNY NVIEGPNDRF GLIASGKAFN DTRQALLDLG LDDATCQRLG IRLHKVGVVW PLEAQLTREF ATGLQEILVV EEKRQIIEYQ LKEELYNWRA DVRPTVLGKF NEVDSGSAGS HYGSGGEWSM PNPSANTLLR ANADLSPALI ARAIAQRLKK MGLDADTTAR IDARLAILQA KEQAMQMLEV SSVKGAERQP WFCSGCPHNT STKVPEGSRA MAGIGCHFMA IWMDRATVGF TQMGGEGVPW VGQQPFSTEQ HVFANLGDGT YFHSGLMAIR QAIAAGVNIT YKILYNDAVA MTGGQQIGER PEGHSVVQIA QSMRAEGAIK IVVVTDEPDK YAHITGLPEG IAVEHRDELD RLQREFREIK GTTVIIYDQT CATEKRRRRK RGSLVDPAKR VVINELVCEG CGDCGVQSNC LSVEPLETEF GRKRQINQST CNKDYSCVKG FCPSFVTVEG GQLRKKSKGQ GPSPFDAAWG ALPEPTMAST IGQQSQVWGI VVAGVGGTGV ITIGQLLGMA AHLEGKGIVT QDAGGLAQKG GATWSHVLIG ASQDAIRTTR VGMAGADLII GCDPVVAAST ETLLRMLRGR TQVALNSHAT PTAAFVKNAN WQNPAEACVS DIVKTVGLDA VAAFNTELAA TRLMGDSIYT NPMLLGFAWQ KGWIPLQQAS LLRAIELNAV AVEQNKTAFT WGRRAAHDPA AVDELLNPGQ VVTLAKRSSL DELIAKRVVF LTAYQNGAYA ERYKSFVQKV KSVDESVGPR SLALSEAVAR YLFKLMAYKD EYEVARLHSH SDFNARIAAL FEGDFKIHYH LAPPLLAKKN TRGELQKRPY GPATLLAFKV LAQFKGLRGT ALDIFGKTEE RRQERALITE YQASINELLD VLGRNQSGGQ SGEGEQTHYQ LALDIARIPE QIRGFGHIKA RHLSAARQNW QELMTRFRGF VAPHTMPG
|
| |