| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3865 |
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| Symbol | secF |
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| ID | 3961467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4315792 |
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| End bp | 4316745 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637918690 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_525095 |
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| Protein GI | 89902624 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TCAAAATCAA ACGCGACATT CCGTTCATGC GGCATGCCAT CATTTTTAAC
GTGGTGTCGC TCGTTACCTT TCTGGCAGCG GTTTTCTTTT TGTTCAGCCG CGGTCTGCAT
CTGTCGGTGG AGTTCACCGG TGGCACCTTG ATGGAGGTGA CCTACACGCA GCCGGCTGAC
TTGAACCTGG TTCGCAGCAC GGTGGCCAAG CTCGGTTTGA ACGATGTCCA GGTGCAAAAC
TTTGGCACCG CGCGTGATGT ACTGATCCGT CTACCGGTGC AAAAAGGCGT CACTTCTGCC
CAGCAGAGTG TGCAGGTGAT GGCCGCACTC AAGGCGGCGG ATGCGTCCGC GGTCATGCGC
CGCACCGAAT TTGTGGGTCC GCAGGTGGGC GACGAACTCG CTGCTGACGG CCTGAAGGCG
CTGGCCTCCG TGGTGGTCGG CATCATGCTG TACCTGTCAA TCCGGTTTGA ATGGAAATTC
GCGGTGGCGG CGATCATCGC CAATTTGCAC GACGTTGTCA TCATCCTCGG GTTTTTTGCG
TTTTTCCAGT GGGAGTTCTC ACTTCCGGTG CTGGCCGCCG TGCTGGCGGT GCTGGGTTAT
TCGGTCAACG AGTCGGTGGT GATTTTTGAC CGGATTCGCG AGAATTTCCG GCGCTATCGC
AAGATGAACA CGATGCAGAT CATCGACAGC GCCATTACCT CGACCATCAG CCGGACCATC
ATCACACACG GATCAACCCA GATGATGGTG TTGTCCATGT TGTTGTTCGG GGGCGCCACG
CTGCATTATT TTGCCCTGGC CCTGACCATT GGCATTTTGT TTGGCATTTA CTCTTCGGTT
TTTGTGGCGG CCGCCATTGC CATGTGGCTG GGCATCCAGC GCGAAGACCT GATCAAGGGT
GGGGCCAAAA AGGAAGAAGA CCCGAATGAC CCCAACGCTG GCGCCACCGT TTGA
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| Protein sequence | MEFFKIKRDI PFMRHAIIFN VVSLVTFLAA VFFLFSRGLH LSVEFTGGTL MEVTYTQPAD
LNLVRSTVAK LGLNDVQVQN FGTARDVLIR LPVQKGVTSA QQSVQVMAAL KAADASAVMR
RTEFVGPQVG DELAADGLKA LASVVVGIML YLSIRFEWKF AVAAIIANLH DVVIILGFFA
FFQWEFSLPV LAAVLAVLGY SVNESVVIFD RIRENFRRYR KMNTMQIIDS AITSTISRTI
ITHGSTQMMV LSMLLFGGAT LHYFALALTI GILFGIYSSV FVAAAIAMWL GIQREDLIKG
GAKKEEDPND PNAGATV
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