Gene Rfer_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3840 
SymbolaceK 
ID3961442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4286873 
End bp4288720 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content59% 
IMG OID637918665 
Productbifunctional isocitrate dehydrogenase kinase/phosphatase protein 
Protein accessionYP_525070 
Protein GI89902599 
COG category[T] Signal transduction mechanisms 
COG ID[COG4579] Isocitrate dehydrogenase kinase/phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCCTA CCCGGCTTGA TTCCTCGCTG GCTTACGACA TTGCCAAGGC CATGATGGAT 
GGCTTTAACC GCCATTACCG CCTGTTCAGA ACCGAGTCGG CGCGCGCCAA GCACCGCTTC
GAGACGGCCG ACTGGCATGG CCAGCAGCGC GCCCAGCGGG ACCGGATCGA GTTTTATGAC
CTGCGGGTGC GTGAATGTTT TATGCGCCTG GCGCGCGAGT TCAAGGCGGA CGAACAGCCC
ATGGAGGTGT GGCAGCAGGT CAAGCTGCAT TACATCGGCC TGCTGGTGGA CCACCACCAG
CCCGAGCTGG CCGAGACTTT CTTCAATTCG GTGACGACCA AAATCCTGCA CCACAGCTAT
TTCCAGAACG ACTTTATCTT TGTGCGCCCG GCGGTGAGTA CCGAGTACAT CGAAAACGAC
GAGTCCGAGA CCAGCCCGAC CTACCGTTCC TACTACCCCA CGCACGACAG CCTGGCCGAG
GTGCTGGTGC AGATGGTGCT GGACTTTGAT TTGCGCTGCC CGTTTGCCGA CTTGGACAGC
GACGCCGCGC GGGTGCAGGC GGCCATGGTC GAGCAACTGG GCGAGGTCAA GCTGCGCGCC
AATTTTCAGC TTCAGGTGCT CTCCGGTCTG TTCTTTCGCA ACAAGGGCTG CTACATCGTC
GGCAAGCTGA TCAACGGCTT TAATGAGTTT CCATTTGCCT TGCCGGTGTT GTACGGCAGG
GCAGGTCAAC TGGTGATTGA TGCCGTCCTG TTTGGCGAGG ATGATTTGCT GATGCTGTTC
AGCTTTGCGC GCGCCTATTT CATGGTGGAC ATGGAAATAC CGTCGGCCTA TGTGCAGTAC
CTGCGCAGCA TGATGCCGCG CAAGCCGCGC AACGAGATCT ACAACGCCCT GGGGCTGGCC
AAGCAGGGCA AGACGCTTTT TTACCGCGAC TTTTTGCATC ACCAGCGCCA CTCCACTGAC
AAGTTCCGCA TTGCGCCCGG CATCAAGGGC ATGGTGATGC TGGTATTTGA CCTGCCCTCG
TTTCCTTACG TGTTCAAGGT CATCAAGGAC TTTTACCCGC CGCCCAAAGA CACCACGCGC
GAGCAGATCA AGGCCAAGTA TTTGCTGGTC AAGCAGCACG ACCGGGTCGG GCGCATGGCC
GACACGCTGG AATACAGCGA AGTGGGTTTT CCGCGCGCGC GCTTTGACGA TGAATTGATC
GCCGAGCTGG AGAAATTCGC GCCCAGCCAG CTCGAGATCA GCGACCGTGA CGGCGACGGC
CGCATTGAAG TCATCATCAA GCACGTCTAT ATTGAACGCC GCATGATTCC GCTCAACATT
TACCTGCAGG AGGCGTTTGA TGCCGGCGGC GCCAACCCGG ACGACACCAG CCCGGCGGCG
CTGCGGGCGC GTGAGCAGAT CGAGCGCGGC GTCATCGAGT ACGGCAACGC CCTGAAAGAC
CTGGTGGCGG CCAACATCTT CCCCGGCGAC ATGTTGTGGA AGAATTTTGG CATCACCCGC
CACGGCAAGG TGGTGTTTTA CGACTATGAC GAGATCGAAT ACATCACCGA CTGCAACTTC
CGCAAGGTGC CGCAGGCGCG CAATGAAGAA GACGAGATGT CGGGCGAGGT CTGGTACCGG
GTCGGCCCCA AGGACGTGTT CCCCGAAACC TTTGCACCTT TCTTGCTCGG CAACCCGTTT
GTGCGCGAGG TGTTCATGAA GCACCACGCC GAGTTGCTGG ACGCGGCTTT CTGGCAAAGC
CACAAGGAGC GCATCCAGGC CGGGCACGTC TATGACGTGT TTCCGTATGA CCAGGGCAAG
CGCTTTCACC CGGAGATCAG CGATGCGCAA GTACCGTCAT CGATCTGA
 
Protein sequence
MFPTRLDSSL AYDIAKAMMD GFNRHYRLFR TESARAKHRF ETADWHGQQR AQRDRIEFYD 
LRVRECFMRL AREFKADEQP MEVWQQVKLH YIGLLVDHHQ PELAETFFNS VTTKILHHSY
FQNDFIFVRP AVSTEYIEND ESETSPTYRS YYPTHDSLAE VLVQMVLDFD LRCPFADLDS
DAARVQAAMV EQLGEVKLRA NFQLQVLSGL FFRNKGCYIV GKLINGFNEF PFALPVLYGR
AGQLVIDAVL FGEDDLLMLF SFARAYFMVD MEIPSAYVQY LRSMMPRKPR NEIYNALGLA
KQGKTLFYRD FLHHQRHSTD KFRIAPGIKG MVMLVFDLPS FPYVFKVIKD FYPPPKDTTR
EQIKAKYLLV KQHDRVGRMA DTLEYSEVGF PRARFDDELI AELEKFAPSQ LEISDRDGDG
RIEVIIKHVY IERRMIPLNI YLQEAFDAGG ANPDDTSPAA LRAREQIERG VIEYGNALKD
LVAANIFPGD MLWKNFGITR HGKVVFYDYD EIEYITDCNF RKVPQARNEE DEMSGEVWYR
VGPKDVFPET FAPFLLGNPF VREVFMKHHA ELLDAAFWQS HKERIQAGHV YDVFPYDQGK
RFHPEISDAQ VPSSI