Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3823 |
Symbol | |
ID | 3960078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4266681 |
End bp | 4267427 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637918648 |
Product | YbaK/prolyl-tRNA synthetase associated protein |
Protein accession | YP_525053 |
Protein GI | 89902582 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein [COG3313] Predicted Fe-S protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAAG TGCACGCCAA GCCTTTGTCT GCCGCTGTGC AGCGCGTGGC CGCTGCCCTG CAGGCGCAGG GGCACGCTTG CGCACCGCTG ATGCTGAGTG ACGCTGCGCG GACCGCGCAG CAGGCGGCCG ACGCGCTCGG CGTGGTCGTT GGGCAGATTG CCAAGAGCAT AATCTTCAGG CGTCTGGCCG ACGACGCGGC GGTGCTGGTG GTGACGGCGG GAGATCAGCG CGTGGACGAG GCCAGGGTCG CGGCGCTGGT GGGGCCGCTG GGCCGCGCGG ACGCCGCTTT CGTCAAGGCC AAAACCGGTT TTTCGATCGG CGGCGTGGCC CCGATTGCAC ACGCGTCAGA TTCAGTGACA CTGATCGACC AGACGCTTTT TCGCTTTCAA GAGATCTGGG CCGCCGCGGG TCACCCGCAT GCCGTGTTCC AGCTGCGCCC ACAGGATCTG GCCCGGCTGA CCGGCGCGCC GGTGGTCGAT GTGGTGCAGG CCTTCGCGCC CGATAGACCA CAGGATGCTA TTGAATTAAT AGCTTCTCGT GAAGTGCTGG CGAGGGCTAA AGGTCAAAAT GTACCTTCAC CGTGCATCTC GGTCTGTCGC ATGAGCGAAG ACACCGGGCT GTGTGAAGGG TGCTTCCGCA CCCTCGATGA AATCATTCAG TGGAGCGGTG TCGATGACCC GGCCAAACGC GCCATCTGGG CGCAGATTGA ACTGCGGCTT GCGGCATTGA AGATCACCAC CGACTAG
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Protein sequence | MHKVHAKPLS AAVQRVAAAL QAQGHACAPL MLSDAARTAQ QAADALGVVV GQIAKSIIFR RLADDAAVLV VTAGDQRVDE ARVAALVGPL GRADAAFVKA KTGFSIGGVA PIAHASDSVT LIDQTLFRFQ EIWAAAGHPH AVFQLRPQDL ARLTGAPVVD VVQAFAPDRP QDAIELIASR EVLARAKGQN VPSPCISVCR MSEDTGLCEG CFRTLDEIIQ WSGVDDPAKR AIWAQIELRL AALKITTD
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