| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3822 |
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| Symbol | |
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| ID | 3960077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4265158 |
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| End bp | 4266663 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918647 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_525052 |
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| Protein GI | 89902581 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCT CTCTCTTTTC CCCGCGGCGC TTGGTGCTGG CACTCGTTTC AGTTGGCGTC
CTGGGTGCGG CGGGCGTTGG TGCCTTGAGT TTTTCACACG CGCAGGCTGC CGTTTCCACA
GCACCCACTG CAAGCGCAGC AGCGACGGCC CCCGTTGTGG CCCTGCCGGA TTTCTCCCAG
ATTGCGGCAC GTAACGGCGC GGCGGTGGTC AACATCAGCG TCACCGGGAT GATCAATACC
TCGGGTGAAG ACAACGGCGA TGGCGCACCA CACGGCGCCA GGCCGGGTAT GCCCGGCATG
GATCCAAACG ATCCGTTCTT TGAATTCTTC AAGCGCTTTC AAGGTCCCAA CGGTGGCTTT
CCGGGCCAGC CCCGGATGCC GATGCATGGC CAGGGCTCGG GATTCATCAT CAGCCCCGAT
GGCGTGATAC TGACCAACGC CCATGTGGTG CGTGACGCCA AAGATGTCAC CGTCAAACTC
ACCGACCGCC GCGAATTCCG CGCCAAAGTG CTCGGCACTG ACCTGAAGAC CGATGTCGCG
GTACTCAAGA TCGATGCCAA AGACCTGCCA ACCATCACGG TGGGCACTAC GCGCGACCTG
AAAGTGGGCG AGTGGGTACT TGCCATCGGA TCGCCGTTTG GCTTCGAGAA CAGCGTGACC
GCAGGGGTGG TGAGCGCCAA AGGCCGCTCA CTGCCGGACG ACAGTTTCGT GCCCTTCATT
CAGACTGACG TGGCCGTCAA TCCCGGCAAC TCAGGCGGGC CGCTGTTCAA TACCCGCGGC
CAGGTGGTTG GCATCAACTC GCAGATTTAC AGTCAAAGCG GCGGCTATCA GGGCCTGTCG
TTTGCCATTC CGATCGAATT GGCAAGCAAG GTCAAGGATC AGATAGTCGC CACCGGACAT
GCCAGCCACG CGCGCCTGGG TGTCGTGATC CAGGAGGTGA ACCAGACTTT TGCCGATTCC
TTCCATCTCG ACAAACCCGA AGGCGCGCTG GTGTCCAACG TTGACAAGGA CGGCCCGGCG
GACAAGGCGG GGCTCAAGAG CGGTGACGTG ATCCTGAAAG TCAATGGCCA ACCGATCATC
ATGTCCAGCG ATCTGCCGGC CCTGATCGGC ACGGCAGCGC CGGGCGATAA GGTCAGTCTT
GAAATCTGGC GTCAGGGCAA GCGCGAACAA TTCACCGCCA GGCTTGGCGA CGCCAGTGCC
AAGGTGGAGC AGCTGGCCAA GGCAGACGAC GGCGTCGGCC AAGGCAAGCT CGGGCTGGCA
CTGCGTGCCT TGCAGCCGCA GGAGAAACGC GCCGCCGGCG TGAACCAGGG TTTGCTGGTC
GAGGATGCAG CTGGCCCTGC CGCCCTGGCG GGCGTGCAAG CGGGTGACGT ACTGGTGGCG
GTGAACGGCA CGCCGATTGA AAGTGTGACC CAAGTTCGCG CCATAGTGGC CAAGGCCACC
AAATCGGTGG CGCTGCTGAT TCAGCGTGAC GGCAGCAAGA TCTTCGTGCC GGTGCGCCTG
GGTTGA
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| Protein sequence | MNTSLFSPRR LVLALVSVGV LGAAGVGALS FSHAQAAVST APTASAAATA PVVALPDFSQ
IAARNGAAVV NISVTGMINT SGEDNGDGAP HGARPGMPGM DPNDPFFEFF KRFQGPNGGF
PGQPRMPMHG QGSGFIISPD GVILTNAHVV RDAKDVTVKL TDRREFRAKV LGTDLKTDVA
VLKIDAKDLP TITVGTTRDL KVGEWVLAIG SPFGFENSVT AGVVSAKGRS LPDDSFVPFI
QTDVAVNPGN SGGPLFNTRG QVVGINSQIY SQSGGYQGLS FAIPIELASK VKDQIVATGH
ASHARLGVVI QEVNQTFADS FHLDKPEGAL VSNVDKDGPA DKAGLKSGDV ILKVNGQPII
MSSDLPALIG TAAPGDKVSL EIWRQGKREQ FTARLGDASA KVEQLAKADD GVGQGKLGLA
LRALQPQEKR AAGVNQGLLV EDAAGPAALA GVQAGDVLVA VNGTPIESVT QVRAIVAKAT
KSVALLIQRD GSKIFVPVRL G
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