| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3815 |
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| Symbol | |
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| ID | 3960070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4259340 |
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| End bp | 4260446 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637918641 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_525046 |
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| Protein GI | 89902575 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTG GACATTCAGT GTTAGGGGCA TTTTTGCTGG CGGCGATGGC CGTGACAGCC
CATGCGCAAA TTTTGATCGG TCAGACCGCG GGTTTCACTG GCTCCGTCGC CGCTGGCGTG
AAAGAAACTG CGGAAGGCGC GAAACTCTAC CTGGATGCGG TGAATGCCAG AGGCGGGGTC
AACGGCCAAA AGATCGACCT CATTTCACTT GATGACAAAT TCGACCCCAA ACTGGCCGCC
GAAAACGCCC GAAAACTGAT CGAGGAGCAA AACGTCGTGG CGATGTTTCT CACACGAGGC
ACACCACAGA CCGAAGCCAT TCTGCCGTTT CTGGACAAAT ATGGCGTGCC ATTGATCGCA
CCATCGACTG GCGCCATGGT GTTGCACACA CCGGTCAAAA AACATGTTTT CAACGTTCGG
GCGACCTACC AGCGAGAAGC CGAAAAGGCC ATCGCCCATC TCGCCTCCAT CGGCATCACC
CGGATTGCTG TGGTGTATAC CGATGACAGC TTTGGTGCGG ATGGCGTGGC AGGCGCTCAA
AAAGGTCTGT CCGCCGCCAA GCTGACCCCG ACCGCGATGG AGAAGTTCGA CCGATCCAAA
CCCGACTTTT CCCAACTGGC CCCCAGGATC GCCAAAACTG ACGCGCAGGC GGTCATGATG
ATCGCTTCCG CCACATCCAC CGCTGACTGC ATCAAGGCCT TGAAAGCGGC AGGCAGCAAC
GCCCAGTTTG TGACACTGTC CAACAATGCT TCCGGCGGGT TTATCAAGGG CCTGGGAGAC
AACGCCCGCG GTGTCATCGT CTCGCAGGTG TTTCCCCAAT CCATCGGTTT TGGGCTTGTC
AAGGAAGCCA CCGATTTGGC CAGGGCCAAG AACCTCACCA ATGTCAGCCC CGCCATGCTG
GAAGGATTCG CATCCGCCAA AGTACTGGTT GAGGCCTTGC GGCGGGCCGG CGCCAAACCC
AGCCGCGAGC ACATTCAGTC TGCACTGGAA GGTCTTCGGA AATTCGATAT TGGCGGGCTG
GACGTCAGCT ACAGCCAGGA AGACCACACC GGGCTGGACT TTGCCGACCT GTCCATCATC
AGTGCGGACG GCAAGTTCAG AAGGTAA
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| Protein sequence | MKLGHSVLGA FLLAAMAVTA HAQILIGQTA GFTGSVAAGV KETAEGAKLY LDAVNARGGV
NGQKIDLISL DDKFDPKLAA ENARKLIEEQ NVVAMFLTRG TPQTEAILPF LDKYGVPLIA
PSTGAMVLHT PVKKHVFNVR ATYQREAEKA IAHLASIGIT RIAVVYTDDS FGADGVAGAQ
KGLSAAKLTP TAMEKFDRSK PDFSQLAPRI AKTDAQAVMM IASATSTADC IKALKAAGSN
AQFVTLSNNA SGGFIKGLGD NARGVIVSQV FPQSIGFGLV KEATDLARAK NLTNVSPAML
EGFASAKVLV EALRRAGAKP SREHIQSALE GLRKFDIGGL DVSYSQEDHT GLDFADLSII
SADGKFRR
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