| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3813 |
|---|
| Symbol | |
|---|
| ID | 3960068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4252242 |
|---|
| End bp | 4252862 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637918639 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_525044 |
|---|
| Protein GI | 89902573 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0677256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA AGCCCCTCGT CACGCTGCTG GCCATTGTCA ATCCCCTGGC CATCGTGCCG
TTCTTCATTC ACTACACGCA GGACTTCACG CGCGAGCAAC GGCGGCGCAC GATCTGGATT
TCATCGTTCA GCACCTTTGT TGTGATTACC ACCAGCGCCC TGATGGGCCT GCATATTCTG
GATTTCTTCA GCATCTCGCT GGCCAGTTTT CAGGTCGGTG GCGGCATGCT GCTGCTGACC
TCGTCCCTGG CCATGCTCAA CGCTCAGCCA GCAGAGGCCA AATCGAATGA AGAAGAAATG
CATGACGCCT CCGTCCGCGC CAGCATTGCG GTAGTGCCGC TCACCATTCC CCTGCTGGCC
GGTCCGGCCA CCATGTCGAC GGTGGTGATT TATGCCGAAA AGGCCAAGAC TTTCTGGCAG
ATGAGCACGC TGGTGGGCTA CGGCCTGGTC ATCGCCCTGG CCACCGCCTT GTGCTTTTCG
CTGGCCCAGC CGATTGCCCG CGGCCTGGGC AAGACCGGCA TCAACGTCAT GACGCGTTTG
ATGGGGCTGA TCCTGGCGGC GCTGGCGGTC GAGGTCATGT CCGACGGCCT GATCAAGCTG
TTTCCGATTC TGGGACGGTA G
|
|---|
| Protein sequence | MDFKPLVTLL AIVNPLAIVP FFIHYTQDFT REQRRRTIWI SSFSTFVVIT TSALMGLHIL
DFFSISLASF QVGGGMLLLT SSLAMLNAQP AEAKSNEEEM HDASVRASIA VVPLTIPLLA
GPATMSTVVI YAEKAKTFWQ MSTLVGYGLV IALATALCFS LAQPIARGLG KTGINVMTRL
MGLILAALAV EVMSDGLIKL FPILGR
|
|---|
| |