Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3809 |
Symbol | |
ID | 3960064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4249178 |
End bp | 4249900 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918635 |
Product | ABC transporter related |
Protein accession | YP_525040 |
Protein GI | 89902569 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACGCG TTAAGGGCCT GACCAAGCAG TTTGGAACCC TGGAAGTGCT GCGGGGTATT GACTGCAGCA TCCAGGCGTC CGAGGTGGTG TGTGTGATCG GTCCCTCCGG CTCGGGCAAA AGCACCTTTC TGCGCTGCCT GAACGGTCTG GAAGATGCGT CCGGCGGGCA GGTGCTGGTG GGCGGCGTTT CGGTGCATGA CCCCAGGACC GATGTGGATG CCCTGCGTTC TGAAATCGGC ATGGTGTTTC AGCGCTTCAA TCTTTTCCCG CACAAAACCG TGCTGGAAAA TATCACGCTG GCCCCCACCA AGGTGCGCGG CCTGAGCGCT GCGCAAGCCC ACAGCCGCGC CCACGACTTG CTGGTCAAGG TCGGTCTGCT CGACAAGATT GACGCCTACC CGAACCAGCT GTCCGGCGGG CAACAACAGC GCGTGGCCAT TGCCCGGGCC CTGGCCATGC AGCCGCGCAT CATGCTGTTT GACGAACCCA CGTCGGCGCT CGACCCCGAG ATGGTGGGGG AAGTCCTGGC CGTCATGCAG GCCTTGGCCG AGGAAGGCAT GACCATGGTG GTGGTCACCC ACGAGATGGG CTTTGCGCGC CAGGTCGCGG ACCGGGTCCT GTTCATCGAC GAAGGCCTGG TGGTCGAGGC AGGAACGCCA GCCGACCTCT TTGATCGGCC CCAGGAAGAA CGCACACGCC GATTCCTGAG CAAGGTGCTC TAG
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Protein sequence | MIRVKGLTKQ FGTLEVLRGI DCSIQASEVV CVIGPSGSGK STFLRCLNGL EDASGGQVLV GGVSVHDPRT DVDALRSEIG MVFQRFNLFP HKTVLENITL APTKVRGLSA AQAHSRAHDL LVKVGLLDKI DAYPNQLSGG QQQRVAIARA LAMQPRIMLF DEPTSALDPE MVGEVLAVMQ ALAEEGMTMV VVTHEMGFAR QVADRVLFID EGLVVEAGTP ADLFDRPQEE RTRRFLSKVL
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