| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3808 |
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| Symbol | |
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| ID | 3960063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4248424 |
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| End bp | 4249191 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918634 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_525039 |
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| Protein GI | 89902568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.158502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCAAG TACTCTGGTT CGGCTGGTTT CGCGCTGACA TCATTGCCGA GTACGCCGTG
CTGTTCTGGC GCGGCCTGCA AATGACCATG CTGGTGACGC TGATCTGCAT CGTGCAGGGC
ACGGCGCTGG GTCTGGCGAT CGGCATGGCG CGCCTGGCAG AAGCCCGCCA CGCGCCCGCC
CGGCAGCTCT GCAAGTTCGC CTTGCGCTGG CCTGCCACCG TCTATGTGAG CTTTTTCCGC
GGCACCCCGC TGTTTGTGCA GATTCTGCTG ATTCACTTTG CGGTGCTGCC GCTGTTCATC
AACCCGGCCG ACGGCCTGCT GATTTCAGGC GAAACCGCGC GCAACCTGAA ACAAAACTAC
GGTGCCTTCC TGTCCGGCGT GATCGCCCTC ACCCTCAATG CGGGAGCCTA TATTTCCGAG
ATCTTCCGGG CCGGCATCCA ATCGATTGAC CGCGGGCAAG TAGAAGCCTC CCGTTCACTG
GGCCTGTCGT TCCCGCGGAC CATGTTCCAC GTCGTGTTGC CGCAGGCGTT TCGCCGCATG
CTGCCGCCGC TGGGCAACAA CGCGATCTCA CTGCTCAAGG ACTCGTCACT GATTTCCGCG
ATTGGTCTGG CCGAGCTGGC CTACGCGGCA CGCACGGTCG CTGGCGCGTA TTCGCGTTAT
TGGGAACCCT ATCTCACGAT TTCGTTGATG TACTGGGTGT TGACGCTGGG CCTGGCCTAT
GTGGTGAAGA ACCTGGAGGC GCGTTATGGA CGAGGTGATA CGCGTTAA
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| Protein sequence | MEQVLWFGWF RADIIAEYAV LFWRGLQMTM LVTLICIVQG TALGLAIGMA RLAEARHAPA
RQLCKFALRW PATVYVSFFR GTPLFVQILL IHFAVLPLFI NPADGLLISG ETARNLKQNY
GAFLSGVIAL TLNAGAYISE IFRAGIQSID RGQVEASRSL GLSFPRTMFH VVLPQAFRRM
LPPLGNNAIS LLKDSSLISA IGLAELAYAA RTVAGAYSRY WEPYLTISLM YWVLTLGLAY
VVKNLEARYG RGDTR
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