Gene Rfer_3794 details

Gene Information

• Locus tag: Rfer_3794
• Symbol: rplD
• ID: 3962921
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 4235031
• End bp: 4235651
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637918620
• Product: 50S ribosomal protein L4
• Protein accession: YP_525025
• Protein GI: 89902554
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.020741
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTCG AACTCCTGAA TGACCAAGGT CTGGCTACTG CAAAATATGA AGCGCCGGAA 
ACCGTGTTCG GTCGCGCTTA CAACGAAGAT CTGGTGCACC AGATCGTCGT TGCTTTCCAG 
GCCAATGCCC GCCAAGGCAC ACGCGCTCAG AAAGACCGTG AGCAGGTCAA GCACTCAACC 
AAGAAACCTT TTAAGCAAAA GGGTACGGGT CGCGCTCGTG CTGGTATGAC CTCTTCGCCG 
TTGTGGCGTG GAGGCGGTCG GATATTTCCG AACATGCCGG ACGAAAATTT CACACAGAAA 
ATCAACAAAA AGATGTATCG CGCTGGCATG GCGTCCATCT TGTCGCAGTT GGCTCGCGAA 
GGTCGCCTGG CTGTGGTTGA TTCCATGAAA GTGGACTCGC CCAAGACAAA GCCCTTGGCT 
GCCAAGTTCA AGGCCATGAA TCTGGAATCC GTCTTGGTGA TTGCCGATGA GGTTGATGAA 
AACCTGTACC TGGCATCCCG GAATCTGGTG AATGTTTTGG TTGTGGAACC ACGCTATGCT 
GATCCAGTGT CCCTGGTTCA CTACCGCAAG GTGATTGTCA CCAAGGCGGC GATGGAAAAA 
CTGCAGGAGA TGTTCGCATG A 

 

Protein sequence

MQLELLNDQG LATAKYEAPE TVFGRAYNED LVHQIVVAFQ ANARQGTRAQ KDREQVKHST 
KKPFKQKGTG RARAGMTSSP LWRGGGRIFP NMPDENFTQK INKKMYRAGM ASILSQLARE 
GRLAVVDSMK VDSPKTKPLA AKFKAMNLES VLVIADEVDE NLYLASRNLV NVLVVEPRYA 
DPVSLVHYRK VIVTKAAMEK LQEMFA