| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3789 |
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| Symbol | rpsC |
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| ID | 3962916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4232338 |
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| End bp | 4233234 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918615 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_525020 |
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| Protein GI | 89902549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.461405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAAA AAATCCACCC AACCGGCTTT CGCTTGTCGA TCAGCCGCAA CTGGGCATCA
CGCTGGTACG CCAATGACCG TGATTTCGCG GGCATGCTGG CTGAAGACAT CAAGGTACGC
GAGTACCTGA AGGCCAAGCT GAAAAACGCG TCTGTGTCGC GTGTATTGAT CGAGCGTCCT
GCCAAGAATG CCCGTATCAC GATTTTCTCG GCTCGTCCGG GCGTTGTGAT CGGTAAAAAA
GGCGAAGACA TCGAGAACTT GAAGCGTGAG TTGTCGCGTC AACTCGGCGT GCCGGTTGCA
GTCAACATCG AAGAGGTGCG CAAGCCCGAA ATTGATGCCA AACTGATTGC CGACAGCATT
ACGCAGCAGC TTGAAAAGCG AATCATGTTC CGCCGTGCCA TGAAGCGCGC CATGCAAAAT
GCGATGCGTC TGGGTGCCTT GGGCATCAAG ATCATGTCGT CAGGCCGGCT CAATGGCATT
GAAATCGCTC GTTGCGAGTG GTACCGCGAA GGTCGCGTGC CGCTTCATAC ACTGCGCGCC
GATATTGATT ACGGCACCTC TGAGGCGCAA ACAACCTACG GCATTATTGG TGTCAAGGTC
TGGGTGTACA AGGGTGACAC CTTGGGGCGT AATGATCTGC CTGCTGCTGT TGAGGCCCGT
ACCGATGAAG AGCGCCGTCC ACGCGGTCCC CGTCGCGATG ATCGCGGTGC TCGTCCAGGT
GCAGACCGTC CGGCCCCCCG TGTTGCACGG CGCCCCCCAA TGGGTGCCAA CACAGCGCCG
TCCGATGGCA GCGACAAACC CGCGGAGGCC ACTGGGGCCG GCGCACCGAA ACCCGCCGTT
CAGCGCGTCC GCAAGGTAGC CGCGCCAGCT GCAGCAGCTG ACGGCAAAGG AGAATAA
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| Protein sequence | MGQKIHPTGF RLSISRNWAS RWYANDRDFA GMLAEDIKVR EYLKAKLKNA SVSRVLIERP
AKNARITIFS ARPGVVIGKK GEDIENLKRE LSRQLGVPVA VNIEEVRKPE IDAKLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGALGIK IMSSGRLNGI EIARCEWYRE GRVPLHTLRA
DIDYGTSEAQ TTYGIIGVKV WVYKGDTLGR NDLPAAVEAR TDEERRPRGP RRDDRGARPG
ADRPAPRVAR RPPMGANTAP SDGSDKPAEA TGAGAPKPAV QRVRKVAAPA AAADGKGE
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