| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3783 |
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| Symbol | |
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| ID | 3962416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4228363 |
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| End bp | 4230174 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918609 |
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| Product | cyclic nucleotide-binding domain-containing protein |
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| Protein accession | YP_525014 |
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| Protein GI | 89902543 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.612784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGACG ATTTTCGCTT TACTGTGGCG CCCTTTGACG AACTCAGCGC CACCGAACAG
GCTCTGGTGC GGGAGACCGC CACACGCGTT TGTCTGGCCG CGGGCGACAC CTTGCTATCG
CCGACCGCCG TGCCGCAGCA CCTTTGGCTG TTGAGCATCG GCCACGTGCA ACAAGACGAA
GACGCCAGCA GCCTGGTGCT GGGTGCTGGC GAAACGCTGG GCTGGCGAGC GCTGCTGACC
GGGCGCTGTC ATGCCACGGC CACGGCGCTC GATGCCGTAC AGGCGTGGCA ATTGCCCAAG
ACGGCGATCC TTAGCTTGCT TGCCAGCAAC GCGCGCTTTA GCGCCCGGGT CTTTGCCGGC
ATGTCGCGCC AACTGGTCGA GGAGGAGGAT GTCAACCACA ACCGCGAATT GCTTGCCCTG
ATGCTGGTAA GGGTGCGCGA CATTCCCCTG CACCCTCCTT TTTACGTCGA TGGCAGCTCC
GATATGGTGT CGGTCTGCCG CCTGATGTCC GAGCATCAAC GCACCAGCGC GCTTGTGCAT
GATGTCCTGG ATGGCGTGCC GCGGTTGGGC TTCTTCACAA CCACGGACCT GCGCGATGCC
ATGCTGCGGC CGCAACCGTT GGCAGTGCGC GAAGTGGCGC ACTTTGCGCT GATTACACTG
CCGCCGGAGG CCGAGTTGTT TGATGCGCTC TTGACCATGT TGCGCCATCG GGTGCACCGC
ATCCTGGTCA AGGACGGCGA CGAGATTCTC GGCGTGCTCA GCCAACTCGA CCTGATGGGC
TTTGTCACCA ACCACTCGCA CCTGATTGCC CTGCAGGTCG ATCAGGCCAG TAGCGCCGAA
GAGCTCAAAG TGGCGGCGCA GCAGGTGGAC GAGTCCGTTG GGCTGCTGGT GCGTGGAGGC
GTGCGCATCG ACATCGTTTC GCGCCTCGTC AGCGGTCTGA ACGCCCAAAT ATTTGCCCGC
CTTTGGTCGC TGGTCGCACC GGCCGAACTG ATTCAAAACA GTGCGCTGCT GGTGATGGGC
AGTGAAGGGC GGGGCGAGCA GATCTTGAAA ACCGACCAGG ACAACGCCTT GCTGCTGCGT
GACGGCTACC ACTGCGAGGG TCTGGCCGAC ATCGTGAACC GCTTCAGCAC CGCACTGCTG
ACCTTTGGCT ACCCCCCCTG CCCAGGCAAC ATCATGGTGA CCAACCCGCT GTGGTGTCAG
CCGCTGGCTG GCTTCAAGGA AATGATTGGC CATTGGTTGC TGGGTGGCAA CCCGGAAGGT
GCCATGAACC TGGCCATCTT CATTGACGCC CACACGGTAT CGGGCGACGC CACACTGTTG
GGTAACGCGC GCGCCTTTGC CTTGGATTTG GCCCAAGGCA GCGAGGTTTT CATTGCTCGA
CTGGCGGACG CCATCAATCA GTTCAGGGAG CCTGCCACGG GTTTCTTTGG CGTTTTGAGC
CGGTTGCGTG GTGCGACGGC GCAGACCTTC GATCTCAAAA AACTCGGCAC TTTCCCCATC
GTCCACGGTG TGCGCGCGCT CGCCCTGGAG CACCGACTGG AGGCCCTGAG TACGGTTGAC
CGGCTGCATG ATTTGGCCAG TCAACATGCC CTGACACCCG AAATGGCCCG TGATCTTGAG
GAAACATTGC ACTTGCTCAT GACACTCAAG TTGCGTAACA ACCTGCGTCA AATCGCACTC
GGGCAGCCCG TCACCAACCT GGTCGTGCTC GCAGACTTGA GCACACTTGA GCGCCATCAG
CTCGACGCTT CATTGGCCAT CATCCGGCAA TTTCGACTGC ACCTGCAGCT ACACTTTCGA
CTCAATGCAT GA
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| Protein sequence | MSDDFRFTVA PFDELSATEQ ALVRETATRV CLAAGDTLLS PTAVPQHLWL LSIGHVQQDE
DASSLVLGAG ETLGWRALLT GRCHATATAL DAVQAWQLPK TAILSLLASN ARFSARVFAG
MSRQLVEEED VNHNRELLAL MLVRVRDIPL HPPFYVDGSS DMVSVCRLMS EHQRTSALVH
DVLDGVPRLG FFTTTDLRDA MLRPQPLAVR EVAHFALITL PPEAELFDAL LTMLRHRVHR
ILVKDGDEIL GVLSQLDLMG FVTNHSHLIA LQVDQASSAE ELKVAAQQVD ESVGLLVRGG
VRIDIVSRLV SGLNAQIFAR LWSLVAPAEL IQNSALLVMG SEGRGEQILK TDQDNALLLR
DGYHCEGLAD IVNRFSTALL TFGYPPCPGN IMVTNPLWCQ PLAGFKEMIG HWLLGGNPEG
AMNLAIFIDA HTVSGDATLL GNARAFALDL AQGSEVFIAR LADAINQFRE PATGFFGVLS
RLRGATAQTF DLKKLGTFPI VHGVRALALE HRLEALSTVD RLHDLASQHA LTPEMARDLE
ETLHLLMTLK LRNNLRQIAL GQPVTNLVVL ADLSTLERHQ LDASLAIIRQ FRLHLQLHFR
LNA
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