| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3777 |
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| Symbol | |
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| ID | 3962410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4220151 |
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| End bp | 4222319 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918603 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_525008 |
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| Protein GI | 89902537 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCA ATCGCCGTCT GCTGCTGGCG ACTGCCGCCG TGGGTTTGGG TCTGGCTCTT
TGGTTGGTTC TTACGCTGGC GCTGGTTTGG TCCACGCTGG AGCCGTCACA GCGGGAATCC
ATGGGCGCGT TGCTGGCCCC CCGCCTGGCG CTGCTGGGCA TGAGCTGGGG GGTGGCTTTA
CTGCTGGTGG CATCACTGCT ACGCCTGCTC TATCGTCGCT ACGTCAGTGC TCCGGCGCGG
CTGTTGGAAG CGACCCGTGT GCTGTTGACG GCCACTGAGC CGCAGTCCTT GCGCCCAAAC
GGGACTACCG AAACCCGGGC GCTGGCGCTA GCCATCAATG AGTTGGCGGC CCAGCGCGAT
CACTTGCGCG CGGACATGAC GCAGCAGGTG GCGCAGGCCA GTTTGAGTGT GAAACAGGAA
AAAAATCGCC TTGCCGCCCT GATGGCCGAG CTGACCCAAA GCGTGGTGGT GTGCAACCTG
GATGGGCGCA TCCTGCTCTA CAACAACCGG GCGCGACTCC AGTTGCCACA ATTTTCCCAG
GCCCGTGGTC TGGCGGATGG CGCCGGGTCA ATCGGCATCG GCCGTTCCAT TTACGCTGTT
TTTGATCGCC AGCTGGTGGT CCATGCCTTG GAAAATATCC ACCGACGCCT GGTGCGCGGC
GCGGCCAGCC CGTCCACCCA GTTTGTCACC ACCACCCCTT CGGGCCAGTT GTTGCGTGTA
CAAATGGCCC CGGTACGTCC GGGCGAGATC GATGCCAGCA ACGTGGATGC CTTCACTGGC
TTTGTGCTGG TGCTTGATAA CATTACGCGC AACTTTGAGC AAGAGTCGCT GCGTGATCAA
CTGCTGCACG GCCTCACCGA GGGCAGTCGC TCCTCCCTGG CCAACATGCA GGCGGCGCTG
GATATGCTGG GTTATCCCGA TCTGGAGCCC GCCATGCACG AACGTTTTAT GGGCGTGCTG
CGTGAAGAGC TGGTGGCCAT GAGCGCGCGC ATTACCGACT TGGTGCAGCA TTCCACGCTG
GGTCTCAAGA CCCGCTGGCC GTTGGAAGAA ATGCTGGGCA CTGATCTGAT GACCGCAGCG
CAGCGGCAGA TTGGAAATTA TTGCCAACGC CCGGTAACTT TGGACACTCT GGACGAGAGC
CTGTGGCTCA AGGTGGAGAG CTTCACGCTG CTGCAGGCGC TGACCTACCT GGCGAGCCGA
TTGGTCGAAG AATTCGAGGT CAAGTTCCTG CGACTGCGGC TGCAGGCTGT GGGCGAGCGC
GCCCAGCTGG ACCTGATCTG GACTGGCCAT GCCATGAGTA CCGAGACGGT GATGACCTGG
GAGATGGATG CCATGCGTTT TGGCACCGAA AGCACGCCGT TGACGGTGCG CGATGTGGTG
GAGCGCCATG GCGGCGAGAT GTGGTTTGAG CGCGAGCGTA TTCGCCACGA AGCTTTCTTC
CGTTTCCTGC TGCCCGTGGC CAGTGCACAG GAGCAGTTGG AGGCGATGCA GGTGATGCAA
ATCGAGAGTC GACCCGAGTA CTTCGACTTC GACCTGTTTC AGGTGACTGA GGAGGGCCGC
GCGCTCGATG AACGGGCACT GTCGGATTTG TCGTATACGG TGTTCGACAC CGAAACCACC
GGCCTCAATC CGGCCGAGGG CGACGAAATC ATCCAGATTG GTGCGGCCCG CATCGTCAAC
AAAAAAATAC TGCGCCAGGA GAGTTTTGAG CAGTTGGTGA ACCCGGACCG GCTGATCTCC
GCCGCCTCCG TTCAGATTCA CGGCATTACG CAGGACCGGG TGATAGGCCA GCCGCGCATT
GGTGAGGTGC TGCCGGCCTT TCACGCCTTT GCCCAGGATA CGGTGCTGGT GGCTCACAAT
GCGGCCTTCG ACATGAAGTT TTTGCAGCTC AAGGAAGCCG CGACCGGGCT GGCTTTTCAC
CAGCCGGTGC TCGACACCCT GTTGCTGTCG GCGGTGGTGC ACCCCAATCA GGAGTCGCAC
CGCCTGGAGG CCATCGCCGA GCGTTTCAAC ATCACGGTAT TGGGTCGGCA CACTGCTTTA
GGCGATGCCA TGGTGACCGC CGAGGTGTGG TTGCGCTTGA TCCCCCTGCT CAATGCCATG
GGCATCTACA CCCTGCGCCA GGCGCGCGAG GCAGCGCAAA AAACCTATTA CGCGCGTCTC
AAGTATTGA
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| Protein sequence | MKINRRLLLA TAAVGLGLAL WLVLTLALVW STLEPSQRES MGALLAPRLA LLGMSWGVAL
LLVASLLRLL YRRYVSAPAR LLEATRVLLT ATEPQSLRPN GTTETRALAL AINELAAQRD
HLRADMTQQV AQASLSVKQE KNRLAALMAE LTQSVVVCNL DGRILLYNNR ARLQLPQFSQ
ARGLADGAGS IGIGRSIYAV FDRQLVVHAL ENIHRRLVRG AASPSTQFVT TTPSGQLLRV
QMAPVRPGEI DASNVDAFTG FVLVLDNITR NFEQESLRDQ LLHGLTEGSR SSLANMQAAL
DMLGYPDLEP AMHERFMGVL REELVAMSAR ITDLVQHSTL GLKTRWPLEE MLGTDLMTAA
QRQIGNYCQR PVTLDTLDES LWLKVESFTL LQALTYLASR LVEEFEVKFL RLRLQAVGER
AQLDLIWTGH AMSTETVMTW EMDAMRFGTE STPLTVRDVV ERHGGEMWFE RERIRHEAFF
RFLLPVASAQ EQLEAMQVMQ IESRPEYFDF DLFQVTEEGR ALDERALSDL SYTVFDTETT
GLNPAEGDEI IQIGAARIVN KKILRQESFE QLVNPDRLIS AASVQIHGIT QDRVIGQPRI
GEVLPAFHAF AQDTVLVAHN AAFDMKFLQL KEAATGLAFH QPVLDTLLLS AVVHPNQESH
RLEAIAERFN ITVLGRHTAL GDAMVTAEVW LRLIPLLNAM GIYTLRQARE AAQKTYYARL
KY
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