| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3776 |
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| Symbol | pyrF |
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| ID | 3962409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4219168 |
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| End bp | 4220031 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918602 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_525007 |
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| Protein GI | 89902536 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC TTGACATGCT GCGCGCCGCC GAGCGCCAAA ACGGTTCGAT GCTGTGCGTC
GGGCTGGACC CCGAACCGAC CCGTTTTCCG GCCCATTACA GTGGCGACGT CAGCAAGATC
TACGACTTTT GCGCCGCCAT TGTGGACGCC ACGGCCGATT TGGTGATGGC TTTCAAGCCG
CAAATTGCCT ATTTTGCGGC GCACCGGGCC GAACCCCAAT TGGAGCGCTT GATCGCCCAC
ATGCGTCGCG CGGCGCCGCA TGTGCCGGTC ATTCTGGATG CCAAGCGCGG CGACATCGGC
AGCACCGCCG AGCAATATGC CAAAGAAGCG TTTGAGCGCT ATGGCGCAGA CGCGGTCACG
CTCTCGCCTT TTATGGGCTT CGACTCGCTG CAGCCCTACC TCCGGTACCA CGGTAAAGGC
GCATTTTTGT TGTGTCGCAC GTCCAATCCC GGCGGTGACG ACCTGCAGTC ACAGCGGCTC
GCCAGCGTCG AAGGCACACC TTTGCTGTAC GAGCACATTG CGCGGCTGGC ACAAGGGCCT
TGGAACCTCA ATGGCCAACT CGGCTTGGTG GTCGGTGCCA CCTATCCGGC AGAACTTGAG
CGCGTCCGTG CGCTGGCACC AACGCTGCCG CTGCTCATCC CCGGCGTTGG TGCGCAGGGC
GGTGATTGCG CGGCCACGGT CAGGGCCGCC TGGCGCGCTG CCCCCGGTAC GTCTGGCGAG
GCACTCGACA CGCTGGCGCC CATCATCGTC AACTCGTCGC GCGCCATCCT TTACGCCTCC
TCGGGCGCCG ATTTTGCGCA GGCCGCGCGC CGGGAGGCGC TGGCAACGCG CGACCTGCTG
CAGGCGGCCA GGCAACCGGC CTAG
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| Protein sequence | MTFLDMLRAA ERQNGSMLCV GLDPEPTRFP AHYSGDVSKI YDFCAAIVDA TADLVMAFKP
QIAYFAAHRA EPQLERLIAH MRRAAPHVPV ILDAKRGDIG STAEQYAKEA FERYGADAVT
LSPFMGFDSL QPYLRYHGKG AFLLCRTSNP GGDDLQSQRL ASVEGTPLLY EHIARLAQGP
WNLNGQLGLV VGATYPAELE RVRALAPTLP LLIPGVGAQG GDCAATVRAA WRAAPGTSGE
ALDTLAPIIV NSSRAILYAS SGADFAQAAR REALATRDLL QAARQPA
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