| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3774 |
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| Symbol | |
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| ID | 3962407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4214052 |
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| End bp | 4217210 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918600 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_525005 |
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| Protein GI | 89902534 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.89198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACTCAC CCACCGACGC CGCCCTCGAA CCCCCTCCAG ACGGCCAGTA CCTGGCCCGG
GCCTTGCAGT TACAGAACAT CAGCATTCGC GGCGCGCGCA CGCACAACCT GAAGAATATT
GATCTGGACA TCCCGCGCAA CCAGCTGGTG GTGATCACCG GCTTGAGTGG CTCTGGCAAG
TCCAGCCTGG CGTTTGACAC CTTGTACGCC GAAGGCCAAC GCCGCTATGT CGAGAGCCTG
TCCACCTACG CGCGCCAGTT TTTGCAGCTC ATGGACAAGC CCGATGTGGA CCTGATCGAG
GGCCTCTCGC CGGCGATCTC GATCGAGCAG AAGGCCACCT CGCACAACCC GCGCTCCACC
GTCGGCACGG TGACCGAGAT TCACGACTAC CTGCGCCTGC TGTTTGCCCG CGCCGGCACG
CCGTTTTGCC CGGAACACGA TTTGCCGCTG CAGTCCCAGA CCGTGAGCCA GATGGTGGAC
GCCGTGCTGG CGCTCCCCCT GGATACCCGG CTGATGATTC TGGCGCCCTT GGCACGCGAA
AAAAAAGGCG AGTTCCTGGA CGTGTTTGCC GATATGCAGG CGCAGGGCTA TGTGCGCTTT
CGGGTCAACG GCCAGGCGTT TGAGTTTGAC GAGCTGCCAG CCCTCAAAAA GACCGAGAAG
CACGACATCG ACGTGGTGAT TGACCGCATC AAGGTGCGCC ACCCCCCAGC CCAACAGGCA
AGCGCCGAGG CAGACTCCGA CGCAGCACCC GACCCGACGC CGGACGCCAG CCGCAGCGCC
GCCCAGGCCG ACTTTGAAAA TCTGCGCCAG CGCCTGGCCG AGAGCTTCGA GGCCGCCTTG
CGGCTCGCCG GCGGGCGCGC CATTGCTGTA GAAATTGATA GCGTATCGCG CAACAACGAC
GGGGGCTACA GGCCAATTGA GCATATATTT AATGCCAAAT TCGCGTGCCC CGTCTGCAGC
TACTCGATTG CCGAACTGGA GCCACGGCTG TTTTCCTTCA ACTCCCCAGT CGGGGCATGT
CCGGCCTGTG ACGGTCTGGG CGCGAATGAT TTTTTTGACC CGGCACGGGT GGTGGCATTC
CCCTCCCTGA GCCTGGCGGG CGGCGCCATC AAGGGCTGGG ACCGGCGCAA CGCCTACTAC
TTTGCCATGC TGGAGAGCCT GGCGGCGCAT TACCAGTTTG ACATTGAACA AGCCTTTGAA
TCGCTGCCGC CAACGGTGCA GCACGCCGTG CTGTTTGGCT CGGGCGAGGA AGACATCAAG
TTCAGCTACG TGATGGACTC CGGCACTCAA ACGGGCAAGA AGGTGAGCAA GAAACATCCG
TTCGAAGGCA TCATCCCCAA CATGCAGCGG CGCTATGCCG AGACCGATTC CGCCGTGGTG
CGCGAAGACC TGGCGCGCTA CCGCAGCACC CAGCCGTGCC CGCAATGCGG CGGCTCCCGG
CTCAGGCGCG AAGCGCGCCA CGTCAAGATT GGCGAAGGGG AGCAAGCGCG CGCTATTTTT
GAACTCAGTC ACCTGACGCT GCGCGAGAGT TATCAGTATT TCAACACTTT GAGCATGCAT
GGCGCCAAGG GCGAAATCGC CAGCAAGGTG GTGCGTGAAA TCGGCCTGCG GCTGAAATTT
CTCAATGACG TCGGGCTGAA CTACCTCAGC CTGGACCGCA GCGCCGAATC TTTAAGCGGC
GGCGAGTCGC AACGCATCCG CCTGGCCAGC CAGATCGGCT CCGGTCTGAC CGGTGTCATG
TACGTGCTCG ACGAGCCCAG CATTGGCTTG CATCAGCGCG ACAACGACCG ACTGATTGGC
ACCCTGAAAC ACCTGCGCGA CATCGGCAAC AGCGTGCTGG TGGTCGAGCA CGATGAAGAC
ATGATGCGCG CCGCTGACCA CATCATCGAC ATGGGGCCGG GCGCAGGCCT GCACGGCGGT
CGCGTGATGG CGCAGGGCAC GTTTGAGCAG GTCAGGGCCA ACACCGAGTC GCTCACCGGC
CAATACCTGG CGCACACGCT GCGGATTGCG GTGCCGCGCC AACGCACGCC CTGGCTGCCC
ACGGTGCAGG CGCGGGCAGC CGCCGACAAG CCCAAAGCGC ACCGCTTCGC GCCGAGTCCG
GCGGCGCTGC GCCGCGCCGA GCGCGAAGCC CTGCATCTGG CGACCCAAGG CAAGCTGCAG
TCCTTGCGCG TGATCGGCGC CAGCGGCCAC AACCTCCAGG GCGTTGATGT TGAATTTCCG
GTCGGCCTGT TCACCTGTGT CACCGGCGTC TCGGGCTCGG GCAAATCAAC CCTGGTCAAC
GACACGCTGT ACGCCGCCGT GGCGCGCACG CTGTACCGGG CGCACGAGGA ACCGGCCGGG
CATGAGGCGA TTGAAGGCAT TGAGCACTTT GACAAGGTGA TCAGTGTCGA CCAGTCCCCG
ATCGGGCGCA CGCCCCGCTC CAACCCGGCC ACCTACACCG GCCTGTTCAC GCCCATTCGC
GAGTTGATGG CCGAGGTGCC GATGGCGCGC GAGCGCGGCT ACGGACCGGG GCGTTTCAGC
TTCAACGTGA GCCAGTCCAG CGGTGGTGGG CGCTGCGAGG CCTGCCAGGG CGACGGCATG
GTGAAAGTTG AAATGCACTT TTTGCCTGAC GTTTATGTGC CCTGTGACGT CTGTGTGGGC
CACCGCTACA ACCGCGAAAC GCTAGAGGTG CTTTACAAGG GCAAAAACAT CGCGCAAATT
CTGGATCTCA CGGTCGAAGT GGCGCATGAG TTTTTCAAGG CGGTGCCGAC CATTGCGCGC
AAACTGCGCA CGCTGCTGGA CGTGGGCCTG TCCTACATTC GCCTGGGGCA ATCGGCCACC
ACGCTGTCTG GCGGCGAGGC GCAGCGCGTC AAGCTGGCGC TCGAACTCAG CAAACGCGAC
ACCGGGCGCA CGCTCTACAT CCTGGACGAA CCCACGACGG GATTGCACTT TGCCGACATC
GACCTGCTGC TCAAGGTCTT GCACCAGCTG CGCGATGCGG GCAACACCAT CGTGGTGATT
GAACACAACC TGGATGTCAT CAAGACCGCT GACTGGCTGA TTGACATGGG CCCCGAGGGC
GGCGCTGGCG GCGGGCAGGT GGTGGGCATC GGCACGCCCG AAGACCTGGC GGCCAACCCG
GCCAGCCACA CCGGGCACTA TTTGAAGCGG CTGTTGTGA
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| Protein sequence | MNSPTDAALE PPPDGQYLAR ALQLQNISIR GARTHNLKNI DLDIPRNQLV VITGLSGSGK
SSLAFDTLYA EGQRRYVESL STYARQFLQL MDKPDVDLIE GLSPAISIEQ KATSHNPRST
VGTVTEIHDY LRLLFARAGT PFCPEHDLPL QSQTVSQMVD AVLALPLDTR LMILAPLARE
KKGEFLDVFA DMQAQGYVRF RVNGQAFEFD ELPALKKTEK HDIDVVIDRI KVRHPPAQQA
SAEADSDAAP DPTPDASRSA AQADFENLRQ RLAESFEAAL RLAGGRAIAV EIDSVSRNND
GGYRPIEHIF NAKFACPVCS YSIAELEPRL FSFNSPVGAC PACDGLGAND FFDPARVVAF
PSLSLAGGAI KGWDRRNAYY FAMLESLAAH YQFDIEQAFE SLPPTVQHAV LFGSGEEDIK
FSYVMDSGTQ TGKKVSKKHP FEGIIPNMQR RYAETDSAVV REDLARYRST QPCPQCGGSR
LRREARHVKI GEGEQARAIF ELSHLTLRES YQYFNTLSMH GAKGEIASKV VREIGLRLKF
LNDVGLNYLS LDRSAESLSG GESQRIRLAS QIGSGLTGVM YVLDEPSIGL HQRDNDRLIG
TLKHLRDIGN SVLVVEHDED MMRAADHIID MGPGAGLHGG RVMAQGTFEQ VRANTESLTG
QYLAHTLRIA VPRQRTPWLP TVQARAAADK PKAHRFAPSP AALRRAEREA LHLATQGKLQ
SLRVIGASGH NLQGVDVEFP VGLFTCVTGV SGSGKSTLVN DTLYAAVART LYRAHEEPAG
HEAIEGIEHF DKVISVDQSP IGRTPRSNPA TYTGLFTPIR ELMAEVPMAR ERGYGPGRFS
FNVSQSSGGG RCEACQGDGM VKVEMHFLPD VYVPCDVCVG HRYNRETLEV LYKGKNIAQI
LDLTVEVAHE FFKAVPTIAR KLRTLLDVGL SYIRLGQSAT TLSGGEAQRV KLALELSKRD
TGRTLYILDE PTTGLHFADI DLLLKVLHQL RDAGNTIVVI EHNLDVIKTA DWLIDMGPEG
GAGGGQVVGI GTPEDLAANP ASHTGHYLKR LL
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