Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3772 |
Symbol | |
ID | 3962405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4212095 |
End bp | 4212598 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637918598 |
Product | single-strand binding protein |
Protein accession | YP_525003 |
Protein GI | 89902532 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCG TTAACAAAGT CATTCTCGTG GGCAACTTGG GGCGCGACCC TGAAATTCGT TACCTGCCCA GTGGCGATCC GGTGGCCAAC ATCACCATTG CGACCAGCAG CAAGTACAAG AGTAAAACCG GTGAGATGGT CGAGGAGACC GAGTGGCACC GTGTCACCTT TTTTGGCAAA CTGGCCGAGA TTGTGGGCCA GTACCTGAAA AAAGGCCGTT CCGTCTATGT GGAAGGCCGC ATCAAGACGC GTAAGTACAC CGACAAGGAC GGCATCGAAA AATACGCCAC CGACATCATT GCCAACGAGA TGCAAATGCT GGGTGGTCGC GAAGGCATGG GCGGCCCATC TGACGACGAT GAAGGCGCCA GCGGCGGCTA TTCGCGTCCG GCACCGGCAT CGCGTCCGGC GGCATCCGCC CCGGCTGCTC GCCCTGCCCC AGCCCCGGCG CAGGCCAAGC CGTCCAGTGG TTTTGATGAC ATGGATGACG ATATTCCGTT CTAG
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Protein sequence | MASVNKVILV GNLGRDPEIR YLPSGDPVAN ITIATSSKYK SKTGEMVEET EWHRVTFFGK LAEIVGQYLK KGRSVYVEGR IKTRKYTDKD GIEKYATDII ANEMQMLGGR EGMGGPSDDD EGASGGYSRP APASRPAASA PAARPAPAPA QAKPSSGFDD MDDDIPF
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