| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3769 |
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| Symbol | |
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| ID | 3962402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4207257 |
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| End bp | 4208672 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918595 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_525000 |
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| Protein GI | 89902529 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGT TCAACGAAAA AGCCTTTGAA CGCACCGGTG CCCTGGTCAA GCGCGCGGCG
GGGGCCAGCG AGGCCACTTT TGGCCCTTTG ATCAAGCGGC TCACGCCGGT CGATGAGCCA
GATCAGCTCG ACTGGGCGGG TGACGCCGAC TGGGCTCGCC TGCAGCAAGA GCCCTTGCGC
GCCAAGCGCT TGCTGCGCCT GGCCGCCGTG GCGTTGTTGG TGATGGTGAT CTGGGCCGCT
TTTGCCCAAA TTGATGAAGT CACCCGTGGG GAGGCCCGCG TTGTGCCAAC CAGCCAGGTT
CAAATTATTC AGAGCGTGGA TGGCGGTGTG GTGGAGGCGC TGCTTGTCCA TGAGGGCCAG
ATCGTCGAAG CCGGCCAACT GATGCTGCGC GTGGATCCCA CCCGCTTCGT TTCCAATATG
CTGGAGAGTC GCGTCGGCCA ACTCGCCCTG CAGGCCAAAG TACTGCGACT TGAGGCACTG
ACGCGTGGCA CCGCCTTCAA TCCGCCCGCG GAGCTGATGC GAGATGCCCC CGACGTTGTT
GCGCAGGAAA TGCGACTGTA CGAGTCGCGT CGGGCCGAGA TCAATGCCCA GACCTTCATT
TCCCAAAACC AGCTGGTCCA GCGTCAGCAG GAGTTGAATG AAGTCCGCGC CCGCCGCGAC
CAGGCTGTTC GAAGCCTGGA GCTGATGACC AAAGAGATCA ACGCCACGCG TCCCATGATT
GCGACCGGGG CCGTCTCCGA GGTTGAGGTG CTCCGTCTGG AACGCCAAGT CGCCGGCCTG
CGCGGCGACA GCGAGCAGGC CACCGCACAG ATCTCGCGCG TGCAGTCGTC CATTCTGGAG
GCGACCCGCA AAATTGAAGA AGTGCAACTC ACCAGCCGCA ACCAGATGAG TGCCGAGCTC
TCCGACGCCA TGAGCAAGCT TGCCAGCCTG TCCCAAGGCG GGCTGGCCCT GCAAGACAAG
GTCAAGCACG CCGACATCAA ATCCCCCGTG CGCGGTACCG TCAAGCGCCT GCTGGTCAAC
ACTGTTGGTG CGGTCGTGCA ACCCGGCAAG GAGGTGGTGG AGGTGGTGCC GCTGGACGAC
ACGCTGATTC TGGAAGTGCA AATTACCCCC AAGGACATCG GCTTCCTGCG CCCGGAGCAA
GAAGCCACGG TCAAGTTCAG CGCCTATGAC TTCTCCATTT ATGGAGGGCT GACGGCCGAT
GTAGTCAATA TCGGCGCCGA CTCGGTGCTC GACGAAAAAG GCAACGCCTT CTACCACGTA
CGGGTACGTA CACGCAAATC CAGCCTGGGC CCCAGTCTGC CCGTCATTCC TGGTATGGTG
GCCCAAGTGG ACATCCTCAC TGGTAAAAAA ACCGTGCTGT CTTATCTGCT CAAACCCGTG
TTGCGTGCCA AAGCCAACGC CATGACAGAA CGATGA
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| Protein sequence | MAWFNEKAFE RTGALVKRAA GASEATFGPL IKRLTPVDEP DQLDWAGDAD WARLQQEPLR
AKRLLRLAAV ALLVMVIWAA FAQIDEVTRG EARVVPTSQV QIIQSVDGGV VEALLVHEGQ
IVEAGQLMLR VDPTRFVSNM LESRVGQLAL QAKVLRLEAL TRGTAFNPPA ELMRDAPDVV
AQEMRLYESR RAEINAQTFI SQNQLVQRQQ ELNEVRARRD QAVRSLELMT KEINATRPMI
ATGAVSEVEV LRLERQVAGL RGDSEQATAQ ISRVQSSILE ATRKIEEVQL TSRNQMSAEL
SDAMSKLASL SQGGLALQDK VKHADIKSPV RGTVKRLLVN TVGAVVQPGK EVVEVVPLDD
TLILEVQITP KDIGFLRPEQ EATVKFSAYD FSIYGGLTAD VVNIGADSVL DEKGNAFYHV
RVRTRKSSLG PSLPVIPGMV AQVDILTGKK TVLSYLLKPV LRAKANAMTE R
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