Gene Rfer_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3759 
Symbol 
ID3961108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4191154 
End bp4192440 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content59% 
IMG OID637918585 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_524990 
Protein GI89902519 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCATA TCGTCATCAT GGGTGCCGGC ATCGGCGGCA TGCCGGCCGC TTACGAAATG 
CGCGAAATGC TCGCCAAAGA GCATCGCGTC ACCGTCGTGA ATGCGACCGA CTATTTTCAA
TTTGTTCCGA GCAACCCATG GCTCGCGGTG GGCTGGCGCA AGCGCGAGGA CATCACCCTG
CCGATTGCCC CCTATCTGCA ACGCAAGGGT ATTGGTTTCA TCGGCAAGGC GGTGACCCAG
ATCGACCCAT TGAGCAACCG GCTGACGCTG CTCGGGGGCG ACACGCTGGA CTATGACTAC
CTGGTGATCA TGACCGGCCC CAAGCTGTCG TTCAGCGAGG TGCCGGGAGC CGGCCCCGTC
AAATCCGGCG GGGGTGGCTT TACCCACTCG GTGTGCAGCG TCGACCATGC CCAGGAATTC
TTTGCCGACT ACCAGAAGTT TCTGGAGAAC CCGGGCCCGG TGGTCATTGG TGCCATGCCA
GGTGCCAGCT GCTTTGGCCC AGCCTATGAA TTTGCCTTCA TTCTCGACAC CGATCTGCGC
AAACGCAAGC TGCGAAACAA GGTGCCCATC ACCTTTGTCA CCAGTGAGCC CTATATCGGC
CACCTGGGCC TGGGCGGTGT CGGTGACAGC AAGTCGATGC TGGAATCCGA GTTGCGCGGA
CGGGACATGA AGTGGATCAC CAACGCCAAG ACCAGCCGGG TGGAAGAAGG CAAGATGTTT
GTCACGCAGC TCGATGACCT GGGCGCGGTC TACAAGGAGC ATGAGGTTCC GTTCAAACTG
TCCATGATGC TGCCCGCCTT CAAGGGGGTG GATGCGGTGG CCGCCGTGCC GAACCTGTGC
AACCCGCGCG GTTTTGTGCT GATTGACGAG TTCCAGCGCA GCAAAGCCTA TCGCAATATT
TTCTCGGCTG GGGTCTGCGT GGCAATCCCT CCGGTGGAGG TCACACCGGT GCCGACAGGA
ACCCCGAAAA CCGGCTACAT GATCGAGAGC ATGGTGACGG CCATCGTGCA CAACATTGCC
GACGAACTGG CTGGCAAGCC GGTCACCGCC AAGGGCACCT GGAACGCCAT TTGCCTGGCC
GATATGGGCG ACACCGGGGC TGCCTTTGTG GCCTTGCCGC AGATCCCGCC GCGCAATGTG
AACTGGTTCA AGATGGGCAA ATGGGTGCAC TTGGCCAAGA TTGCGTACGA GAAATATTTC
ATGCGCAAGA TCAAAAAAGG CACCTCCGAG CCGATCTATG AAAAATACAT TCTGAAACTA
TTAGGCATCG TGCGGGTCAA CAAGTAG
 
Protein sequence
MAHIVIMGAG IGGMPAAYEM REMLAKEHRV TVVNATDYFQ FVPSNPWLAV GWRKREDITL 
PIAPYLQRKG IGFIGKAVTQ IDPLSNRLTL LGGDTLDYDY LVIMTGPKLS FSEVPGAGPV
KSGGGGFTHS VCSVDHAQEF FADYQKFLEN PGPVVIGAMP GASCFGPAYE FAFILDTDLR
KRKLRNKVPI TFVTSEPYIG HLGLGGVGDS KSMLESELRG RDMKWITNAK TSRVEEGKMF
VTQLDDLGAV YKEHEVPFKL SMMLPAFKGV DAVAAVPNLC NPRGFVLIDE FQRSKAYRNI
FSAGVCVAIP PVEVTPVPTG TPKTGYMIES MVTAIVHNIA DELAGKPVTA KGTWNAICLA
DMGDTGAAFV ALPQIPPRNV NWFKMGKWVH LAKIAYEKYF MRKIKKGTSE PIYEKYILKL
LGIVRVNK