| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3756 |
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| Symbol | mnmA |
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| ID | 3961105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4189299 |
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| End bp | 4190453 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918582 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_524987 |
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| Protein GI | 89902516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC GACACAGTGG GCAACGCGTG GTGGTGGGAT TGAGCGGAGG CGTGGACTCG
GCCGTGACCG CCTGGCTGCT CAAGCAGCAG GGCTACGAGG TCATTGGCAT CTTCATGAAA
AACTGGGAGG ATGACGATGA CAGTGAATAC TGCTCCTCCA ACGTTGACTT TATCGATGCG
GCCGCCGTGG CGGATGTGAT CGGCATCGAG ATTGAGCACG TCAACTTTGC CGCCGAATAC
AAAGACCGGG TGTTTGCCGA ATTTTTACGC GAGTACCAGG CCGGACGCAC ACCGAATCCG
GACATCCTGT GCAATGCCGA GATCAAGTTC AAGGCGTTTC TGGACCACGC GCTGCGCTTG
GGGGCGCAAA AAATCGCCAC CGGCCACTAC GCCCGGGTCC GTTGCGTGGC TGCCGACGGT
CGCGTGCTCG ACGCGGCGCA GGCACAGATG AGCGATGGGC GCTTCGAGTT GCTCAAGGGC
CTGGACCCGT CCAAAGACCA GAGCTATTTT TTGCATCGAC TGAACCAGGC GCAGTTGTCG
AAAACCCTGT TTCCCGTGGG CGAACTGCTC AAGACCGAGG TGCGTCGCCT GGCGCTGGAG
ATTGGCCTGC CGAACGCGAA GAAAAAGGAC TCCACTGGCA TTTGTTTCAT TGGCGAACGT
CCGTTTCGTG ATTTTTTGAA TCGCTACATT GCGCGTGAGC CGGGCCCCAT CAAGGATGAC
AAAGGCCGCA CCATCGGCCA GCATGTGGGC CTGAGTTTTT ACACCCTGGG TCAGCGCCAG
GGCTTGGGCA TTGGCGGCCT CAAGGCCAAA GGCGCGCAAC GTGGCGGTGG CGAGCACGCG
CCCTGGTTTG TGGCGCGCAA AGACCTGGCA ACCAACACGC TGTGGGTGGT GCAAGGTCAC
GAGCACCCGT GGTTGCAGTC GCACGGCCTG AGCGCGCAGG ATGCCAGTTG GGTGGCCGGC
ACGGCCCCGC AAGCGGGCCG GTTCAGCGCC AAAACCCGCT ACCGTCAGCT TGATGCGCCG
TGCACGCTGG CCGCGGGGGC TGGTGCGGCC TTCCACCTGA GCTTTCCCGA GCCCCAATGG
GCCGTGACCC CCGGGCAGTC TGCGGTGCTG TATGACGACG AGGTGTGCCT GGGCGGCGGC
GTGATTGCCG CCTGA
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| Protein sequence | MNKRHSGQRV VVGLSGGVDS AVTAWLLKQQ GYEVIGIFMK NWEDDDDSEY CSSNVDFIDA
AAVADVIGIE IEHVNFAAEY KDRVFAEFLR EYQAGRTPNP DILCNAEIKF KAFLDHALRL
GAQKIATGHY ARVRCVAADG RVLDAAQAQM SDGRFELLKG LDPSKDQSYF LHRLNQAQLS
KTLFPVGELL KTEVRRLALE IGLPNAKKKD STGICFIGER PFRDFLNRYI AREPGPIKDD
KGRTIGQHVG LSFYTLGQRQ GLGIGGLKAK GAQRGGGEHA PWFVARKDLA TNTLWVVQGH
EHPWLQSHGL SAQDASWVAG TAPQAGRFSA KTRYRQLDAP CTLAAGAGAA FHLSFPEPQW
AVTPGQSAVL YDDEVCLGGG VIAA
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