| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3753 |
|---|
| Symbol | |
|---|
| ID | 3961102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4185504 |
|---|
| End bp | 4186919 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637918579 |
|---|
| Product | NAD(P) transhydrogenase, beta subunit |
|---|
| Protein accession | YP_524984 |
|---|
| Protein GI | 89902513 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.423097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGA GTTTGGCCAC GGTCGCCTAC ATTGGCGCGA CCATTTTGTT CATTCTGAGC
CTGGGCGGTC TGTCCAACCA GGAAAGCTCT CGCCGAGGTA ATCTGTTCGG CATGATCGGC
ATGGCTATTG CCGTGCTGGC CACGGTGTTT GGGCCGCAAG TAACCGGTGG TGGCTACGCC
TGGATCGTTG GCGCGATGGT CATTGGCGGC AGCATCGGTT TGTATTTGGC GCGCAGCGTG
CAAATGACGC AAATGCCCGA GTTGGTGGCC TTCATGCACA GCATGGTGGG CTTGGCGGCG
GTGCTGGTGG GTTTTGCAAC TTTTGTGGAC CCTACAGCCA CCAAAGGCTT CGAGGGTGCC
GCCAAAACCA TTCACGAGCT TGAAATTTAC ATCGGCATCC TCATCGGTGC GGTCACCTTG
TCGGGCTCGG TCATTGCTTT TGGCAAATTG TCGGGGCGCA TCAGCGGCAA CCCAGTGTTG
TTGCCGGGTC GTCACTGGAT GAATCTGGCA GGTTTGCTGG TGGTGATTTA TTTTGGTGGC
GTGTTCATGG GCGCTCACAC GGTTCAAGAT GGCATGACCC CGATTGTGGT CATGACCGTG
ATCGCCCTGC TCTTTGGTGT GCACATGGTG ATGGCCATTG GCGGCGCCGA CATGCCGGTG
GTGGTGTCCA TGCTCAACAG CTATTCCGGC TGGGCGGCAG CGGCCACCGG TTTCATGCTG
TCCAATGACT TGCTGATTGT GGTGGGTGCG TTGGTGGGTT CCAGCGGCGC GATTCTCTCG
TACATCATGT GCAATGCCAT GAACCGCAGC TTCATCAGCG TGATTGCGGG TGGCTTTGGT
ACCACCAGTG CCAAACCTGC AGCAGCAGGG GGAGCCGAGC CGGCCGGTGA AGTGACGCCG
ATCAGTGCTA TCGAAACCGC TGAACTGCTG CGTGAGGCCA AAAGCGTCGT CATTGTTCCC
GGCTACGGCA TGGCGGTGGC GCAGGCTCAG CATACGGTGT ATGAAATTAC CAAGCATCTG
CGTGAAAAGG GTGTCAATGT GCGTTTTGGT ATTCACCCGG TCGCCGGTCG TATGCCAGGC
CACATGAACG TGTTGTTGGC TGAAGCCAAA GTGCCCTATG ACATCGTGTT CGAAATGGAT
GAACTCAACG ACGACTTCCC CAAGACCGAT GTGGTCATGG TGATTGGCGC CAACGACATC
GTCAACCCCG GCGCCCAGGA CGACCCGACC AGCCCGATTG CCGGCATGCC GGTGCTCGAA
GTCTGGAAGG CCAAGACCTC CATCGTCATG AAGCGCAGCA TGGCATCAGG CTACGCCGGC
GTGGACAACC CGCTGTTCTA CAAAGAGAAC AACCGCATGT TGTTTGGCGA TGCCAAGAAG
ATGTTGGATG AAGTCCTGAT TGCATTGATG TCCTGA
|
|---|
| Protein sequence | MNSSLATVAY IGATILFILS LGGLSNQESS RRGNLFGMIG MAIAVLATVF GPQVTGGGYA
WIVGAMVIGG SIGLYLARSV QMTQMPELVA FMHSMVGLAA VLVGFATFVD PTATKGFEGA
AKTIHELEIY IGILIGAVTL SGSVIAFGKL SGRISGNPVL LPGRHWMNLA GLLVVIYFGG
VFMGAHTVQD GMTPIVVMTV IALLFGVHMV MAIGGADMPV VVSMLNSYSG WAAAATGFML
SNDLLIVVGA LVGSSGAILS YIMCNAMNRS FISVIAGGFG TTSAKPAAAG GAEPAGEVTP
ISAIETAELL REAKSVVIVP GYGMAVAQAQ HTVYEITKHL REKGVNVRFG IHPVAGRMPG
HMNVLLAEAK VPYDIVFEMD ELNDDFPKTD VVMVIGANDI VNPGAQDDPT SPIAGMPVLE
VWKAKTSIVM KRSMASGYAG VDNPLFYKEN NRMLFGDAKK MLDEVLIALM S
|
|---|
| |