| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3736 |
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| Symbol | |
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| ID | 3961085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4167554 |
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| End bp | 4169737 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918562 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_524967 |
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| Protein GI | 89902496 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.915212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCG ATCGCCGTAA TTTCCTGCGC ATGACCGCCA ACACGGGCGC CGCCGCCGCC
GCGTTCGCCA TGTTCCCGCC CGCTATCCGC AAGGCACTGG CGATCCAGGC CGACAACCAG
ACGGGCACGA TCAAGGATGT CGAGCACATC GTCATCCTGA CGCAGGAAAA TCGCTCGTTC
GACCACTACT TCGGCACTTT GGCCGGCGTG CGCGGCTTCG GCGACCGTTT CCCGATTCCG
GTCATGGATG CACTGGGCAA CAAGGGCAAG AACGTGTGGT ACCAGGCCAA CGATACAGAC
CCCGCCAACC CGCGCATGAT TGCGCCGTTT CGCCTGAACA CGGTCCAGAC TTTCGACTAC
ATGCGCGTAA GCGGCACGCC ACACGCCTGG CTTGACGCCG AAGCCGCCTG GGACCACGGC
CGCATGAACG CCTGGCCGAA ATGGAAGAAG AACCACTCGA TGGGCTACTT CACCGAGGCA
GACATGCCCT TTCAGTACGC GATGGCCAAC GCGTTCACCC TTTGCGACGC GTACCACTGC
TCGTTCCAGG GGGGCACCAA CACCAACCGC CTGTTCCACT GGACCGGCAC CAACGACCCG
CTCGGCAAGA GCAATGGCCC GGCTACCTAC AACGACTACG ACTGGTTCGA ATCCGACCCG
GGAAAGAACG GCGGCTATAC CTGGACCACC TACCCCGAGC GGCTCGAAAG CGCCGGCGTC
AGCTGGCAGG TGTACGAGAA CATGGACGAC AACTACACCG ACAACCCGCT GGCCGGCTTC
AAGGTGTTCC GTGACGCGTT TTACGCGCGG CCCGGGTATT CCCAGTCGCT CAAGGACCGC
GGTGTCAGCA CGCGCGATCT GGACCTGCTC AAGGCCGACG TTCTGGCCAA CAAGTTGCCG
CAAGTCAGCT TCATTGTGGC GACGGCTGAG GGCTCGGAAC ACCCCGGTCC CTCCAGCCCG
GCCCAGGGCG CGGACTACAC GGCCAAGGTG CTGGATGCAC TGACCGCCAA CCCCGGTGTC
TGGAGCAAGA CCGTGTTGTT TGTCAACTTT GATGAGAACG ATGGTTTCTT CGACCACGTG
CCACCACCGG CGGCGCCCAG CTACACGAGC TATGACCCCG ATCCGGCAAA AGCGGCATGG
GCCGGCGCCT CCACCGTCGA TACAAGCGGC GAGTACCACG AAATCATCTT GCCGTACCAG
ACCAATCCGT CCGAACCACT GGCGCTGCAC CGTCCGTACG GTCTGGGCCC GCGGGTGCCG
ATGTACGTGA TCTCACCCTG GTCGAAGGGC GGCTGGGTCA ACTCGCAAGT GTTTGACCAC
ACGTCGGTGA TCCGCTTCGT TGAGCAACGT TTCGGTGTGA TCGAACCCAA CATCAGCGCC
TGGCGCCGTG CGGTCTGCGG CGATCTGACC ACTGCGTTCA ACTTCAAGGA CCCGGACAAC
ACCGAGTTCT TCAAGAAGTT CCCCGATACC GTGGCACTGG CCAACCGGGC CCGCGCGCTC
ACCAAGAAGA CGACACCACC GACGCCCGCG CTGCCTGATC TGCCGACGCA AGCCGTCGGC
ACCCGGCCGT CGCGCGCGCT GCCGTACGAA TTGCACACCG GCGCCAAGGT GCTATCGGCC
ACCTCGATTG GGCTGACCTT CAGCAATACC GGCAGCGCGG CCGCGGTGTT CCATGTCTAT
GATCGCAAGC ACCTCGACCA GATTCCGCGT CGCTATACGG TGGAGGCCGG CAAACAGCTC
ATCGGTAATT GGGACCTCAG CGCCGACAGC GGCGCCTATG ACCTCTGGGT GCTCGGCCCC
GCCGGTTACC ACCGCCACTT CACGGGTACG GCTGTGACGA CGGCGGCCGA CCCAATGCCC
GAAGTGCAGG TCTGCTATGA CATCGCCAAC GGCAATGTCT ATCTCAAGCT GTCCAACAGC
GCGAGCGTCG CGGCAAACTA CACGATCACG GCGAACGTCT ACTTGACCGA TGGTCCCTGG
ACCGGCACGG TGGCGGCCAA GGGCCAGTTC GAACAACACT GGTCATTGCA GTCCAGTGGT
CACTGGTACG ACTTTACCGT GACGGTGAAG GGCTTGCCCG GCTACTCACG GCGCTTCTCG
GGCCGTGTGG AAACCGGCGA CGCCACGATC AGCGACCCGG CACTGGGCGG CGTTGCGACC
GGCGATCAGA TCAGCATCGC CTAA
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| Protein sequence | MSIDRRNFLR MTANTGAAAA AFAMFPPAIR KALAIQADNQ TGTIKDVEHI VILTQENRSF
DHYFGTLAGV RGFGDRFPIP VMDALGNKGK NVWYQANDTD PANPRMIAPF RLNTVQTFDY
MRVSGTPHAW LDAEAAWDHG RMNAWPKWKK NHSMGYFTEA DMPFQYAMAN AFTLCDAYHC
SFQGGTNTNR LFHWTGTNDP LGKSNGPATY NDYDWFESDP GKNGGYTWTT YPERLESAGV
SWQVYENMDD NYTDNPLAGF KVFRDAFYAR PGYSQSLKDR GVSTRDLDLL KADVLANKLP
QVSFIVATAE GSEHPGPSSP AQGADYTAKV LDALTANPGV WSKTVLFVNF DENDGFFDHV
PPPAAPSYTS YDPDPAKAAW AGASTVDTSG EYHEIILPYQ TNPSEPLALH RPYGLGPRVP
MYVISPWSKG GWVNSQVFDH TSVIRFVEQR FGVIEPNISA WRRAVCGDLT TAFNFKDPDN
TEFFKKFPDT VALANRARAL TKKTTPPTPA LPDLPTQAVG TRPSRALPYE LHTGAKVLSA
TSIGLTFSNT GSAAAVFHVY DRKHLDQIPR RYTVEAGKQL IGNWDLSADS GAYDLWVLGP
AGYHRHFTGT AVTTAADPMP EVQVCYDIAN GNVYLKLSNS ASVAANYTIT ANVYLTDGPW
TGTVAAKGQF EQHWSLQSSG HWYDFTVTVK GLPGYSRRFS GRVETGDATI SDPALGGVAT
GDQISIA
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