| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3735 |
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| Symbol | |
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| ID | 3961084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4165088 |
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| End bp | 4167271 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918561 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_524966 |
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| Protein GI | 89902495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCG ATCGCCGTAA TTTTTTGCGT ATGAGCGCCA ACACAGGCGC CGCCGCCGCC
GCGCTCGCCG CGCTGCCTTT GAGTATCCGC AACGCCCTCG CCGTTGAACC CGCCGTTGAA
ACCGGCACCA TCAAGGACCT CAAACACATT GTCATTCTGA TGCAGGAGAA TCGTGGCTTC
GACCACTATT TCGGCACCAT GAAGGGCGTG CGCGGGTTCG GCGATCGCTT TCCGATACCG
CTGCAAAGCG GCAAGCCGGT CTGGTACCAG TTCAACGGCA AGGCCGACGG CACGCCCGAC
CCTACCGCAC CGTCCGACGG TACCGAAATT GCGCCATTTC ATCTCGATCC GAAAAAATTC
AATGCCATGC TCGCGCCCAG CACGCCGCAC AGCTTCTCGG ACTCGCAGGC GGCATGGAAC
CAGGGCAAGT TCGGCTATTG GCCGAAGTAC AAGAACGATA ATTCAATGGG CTACTACAAG
CGGGAAGATA TTCCGTTCCA GTTCGCGCTG GCCGAAGCCT TCACGATTTG TGACGCCTAC
CATTGCTCGA TCACCACCGG GACCGACCCC AACCGGATCA CCTTCTTTAG CGGTTCGAAC
TTCAATCCCG TGCTGGCGGC CCAGGGCATC AATTGCACCG ACACCGATTC CGAGCCCAAC
AATGTGCGCT GCTGGATCGG CAACCCGGCC GTCGACAAGT GGCCGGTACC AGGCTACACC
TACAAGGATA CGGCGTTCAA ATGGCCGACG CTGCCGGACC TTCTCGAACA AGCCGGCATC
AGCTGGCGCA TCTACCAGGA CCCCAACGAC AACTGGACCG GCGCGATGCA CGGATGCCTC
GCTTTTGAGA GCTTCAGAAC GGCGCAACCC GGCTCTTCCA TCTACAAGAA CGGCATGTCG
CTCTGGACGC TCGAGGACCT CGCCAATGAC GTCAAGAACG GCACGCTGCC GCAAGTCTGC
TGGGTGCTTC CTCCTCAAGT ATTTTCCGAG CATCCCGGCG GACCTTCCAG CCCTCTGAAA
GGCAGCAATT TCACAGAGCA GGTGTTGAAT GCACTGACCG CGAACACCAG CGTCTGGAGC
AAGACGGCGT TCTTTTTGAC CTTTGACGAA AACGACGGTC TGTTCGATCA CGTGCCGCCG
CCGGCCCCGC CGTCCTACAA CGCGGACGGC ACCCTGGCTG GCAAAGCCAC TCTCAAGCTC
GATGGCGAGT ACTTTTCGGA CCCGGCAGGA AAATACCGGA AAGTCGAAGA CACGATTTCG
GGCAGTGTTC GACCCTTCGG GCTGAGCGCA CGCGTTCCGA TGTACGTGGT TTCGCCGTGG
AGCAAGGGCG GCTGGGTCGC GTCCGAAGTG TTCGATCACA CCTCATTGGG GATGTTTCTG
GAAAAGCGCT TCGACATCAC TGTTCCGGCC ATCAGCCCGT GGCACCGCGC CGTCTGCGGC
GACCTGACCT CGGCGTTCGA CTTCGTGCAG GCGAAGGACG CGGCGTGGCC AACGCTGCCC
GACACCAGCA ACTACGCCGT CGTCGACGCG CAGCAAAGAT CCATGCTGCC GTACTTCATT
CCCAAGACGC ACGAGCCGCT GTTCCAGGAA AAAGGGGTTC GCTATTCGCG CAGACTGCCC
TACGAGTTGC ACGTCAACGC CACTGTCAAG GCCGGCATCA GCGTTGAGCT GAATTTCGCC
AACATGGGCA AACAGGGCGC GGTGTATCAC GTCTACGACA AGATGCACCT CGATCGCATT
CCGCGCCGCT ATACCGTTGA AGCCGGAAAG ACGCTGGCCG ACAGCTGGGA TGTGTCGGCT
GACCTGGGCA AGCATGACTT GTGGGTGTAC GGACCGAACG GTTTTGTGCG CGTATTCAAG
GACGACGCGC CAACCGCTGC CAGCCCGGAA TGCCGGGTCT GTTATGACGT CGCGAACGGG
GATGTCTACG TCAAACTCAG CAACACCGGG GCGCAGGCCA GCACGCTCAC GATTCAGGAC
AATGCTTACG GCAGTGGCGG ACCCTTGGTG GTGAAGGTCG AGCCCGGCAA GGTAGTGGAG
CAATACTGGA CGCTGCGCAA GAGCGGTAAC TGGTATGACT TCAGTGTGAC TGCTGACACG
AGCAAGGGTT ATCTGCGCCG CTTTGCAGGC CGGGTCGAGA CCGGTCAGCA TGGGCTCAGC
GACCCGGCGA TGGGGACTGC GTAA
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| Protein sequence | MSIDRRNFLR MSANTGAAAA ALAALPLSIR NALAVEPAVE TGTIKDLKHI VILMQENRGF
DHYFGTMKGV RGFGDRFPIP LQSGKPVWYQ FNGKADGTPD PTAPSDGTEI APFHLDPKKF
NAMLAPSTPH SFSDSQAAWN QGKFGYWPKY KNDNSMGYYK REDIPFQFAL AEAFTICDAY
HCSITTGTDP NRITFFSGSN FNPVLAAQGI NCTDTDSEPN NVRCWIGNPA VDKWPVPGYT
YKDTAFKWPT LPDLLEQAGI SWRIYQDPND NWTGAMHGCL AFESFRTAQP GSSIYKNGMS
LWTLEDLAND VKNGTLPQVC WVLPPQVFSE HPGGPSSPLK GSNFTEQVLN ALTANTSVWS
KTAFFLTFDE NDGLFDHVPP PAPPSYNADG TLAGKATLKL DGEYFSDPAG KYRKVEDTIS
GSVRPFGLSA RVPMYVVSPW SKGGWVASEV FDHTSLGMFL EKRFDITVPA ISPWHRAVCG
DLTSAFDFVQ AKDAAWPTLP DTSNYAVVDA QQRSMLPYFI PKTHEPLFQE KGVRYSRRLP
YELHVNATVK AGISVELNFA NMGKQGAVYH VYDKMHLDRI PRRYTVEAGK TLADSWDVSA
DLGKHDLWVY GPNGFVRVFK DDAPTAASPE CRVCYDVANG DVYVKLSNTG AQASTLTIQD
NAYGSGGPLV VKVEPGKVVE QYWTLRKSGN WYDFSVTADT SKGYLRRFAG RVETGQHGLS
DPAMGTA
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