Gene Rfer_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3729 
Symbol 
ID3961078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4160156 
End bp4161418 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content65% 
IMG OID637918555 
Productaminotransferase, class I and II 
Protein accessionYP_524960 
Protein GI89902489 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACC CCCCACTCAT CACGGCCCCG TCGGGCTGGC AACTGGCGCG CCGCGCCGCG 
CGCATGAACC CGTCAGTGAT CCGCGAAATC CTCAAGGTGA CCGAACGGCC CGGCATCATC
AGTTTTGCCG GTGGCCTGCC ATCAAGCAAG ACGTTTCCGG TGGCCGAGTT TGAAGCGGCT
TGTGCCAAGG TCTTGCGCGA CGACCCCGCG GCGGCCCTGC AATACGCCGC CAGCGAAGGC
TTTGGCCCCT TGCGCGAGAT GGTGGCCGAG AATTTGCGCG TTCAGGCCGC ATCCGCCGGA
CTGACCTGGC AAGTGGACCC GGCCCAGGTA CTGATCACCA CCGGCTCACA GCAGGGCCTG
GACCTGGTAG CCAAAGTGCT GGTGGATGCA GGCAGCCGCA TTCTGGTCGA ATCACCCACC
TACCTGGGCG CCGTGATGGC GTTCACGCCG ATGGAGCCAG AAGTGGTGAG CGTGGCCAGT
GACGATGACG GCGTGGACAT GGAGGCGCTG CGGCAAGCCG CTGTTGCCGC GGGAACAGGT
GAGGCGGCCC GCTTTCTTTA CGTGCTGCCC AACTTCCAGA ACCCCACCGG CCGCACCATG
AGCGAAGCAC GCCGCGCCGC TTTGAGTACC GAGGCCGCAC GCCTGGGCCT GCCCCTGATC
GAGGACAACC CCTACGGCGA CCTGTGGTTT GATGCGCCGC CGCCAGCACC TTTGACCGCG
CGCAACCCCG ACGGCTGCAT CTATTTGGGC TCATTCTCCA AAGTGCTGGC ACCGGGTTTG
CGGCTGGGCT TTGTGGTGGC GCCCAAAGCG GTCTACCCCA AACTGCTGCA AGCCAAACAG
GCCGCCGACC TGCACAGCCC CGGCTTTAAC CAGCGCATGA TTGCCGAGGT GATGAAAGAC
GGCTTTCTGG ACCGCCACGT GCCCACCATC CGCGCGCTCT ACAAGTCCCA GCGCGACGCC
ATGCTGGAGG CTCTGGCGCA GCACTTTCCG GCCTCCAATA GCCAGCCCGA CCAGTCGCTG
ACCTGGAACA CCCCGGCAGG CGGCATGTTT TTGTGGGCCC GTCTACCCAA GGACATGAGC
GCAGTGGACT TGCTGCCCTT TGCAGTCGAC AAGGGTGTGG CCTTTGTGCC CGGCGCGCCG
TTCTACGCCG ACCACGGTGA CCCGCGCACG CTGCGCCTGT CGTTTGTCAC CCCCAGCGTG
GCGGAGATCC ACCAAGGTGT GGCCGCATTG GCGGCAGCCA TCAAAGAACG TCAGGCAGCC
TGA
 
Protein sequence
MNNPPLITAP SGWQLARRAA RMNPSVIREI LKVTERPGII SFAGGLPSSK TFPVAEFEAA 
CAKVLRDDPA AALQYAASEG FGPLREMVAE NLRVQAASAG LTWQVDPAQV LITTGSQQGL
DLVAKVLVDA GSRILVESPT YLGAVMAFTP MEPEVVSVAS DDDGVDMEAL RQAAVAAGTG
EAARFLYVLP NFQNPTGRTM SEARRAALST EAARLGLPLI EDNPYGDLWF DAPPPAPLTA
RNPDGCIYLG SFSKVLAPGL RLGFVVAPKA VYPKLLQAKQ AADLHSPGFN QRMIAEVMKD
GFLDRHVPTI RALYKSQRDA MLEALAQHFP ASNSQPDQSL TWNTPAGGMF LWARLPKDMS
AVDLLPFAVD KGVAFVPGAP FYADHGDPRT LRLSFVTPSV AEIHQGVAAL AAAIKERQAA