Gene Rfer_3723 details

Gene Information

• Locus tag: Rfer_3723
• ID: 3963257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4153029
• End bp: 4154963
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637918549
• Product: flagellar hook-associated protein
• Protein accession: YP_524954
• Protein GI: 89902483
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.875784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGAC TTCTCAGCGT TGGGACCCGC GCCCTGCAGG CCAACCAGGT CATGCTGCAG 
ACGGCAGGCA ATAACATTGC CAATGTCAAC ACACCGGGTT ACTCGCGCCA GAGTGCGGTC 
CTGCAAACCT CAACGGGCCA GTTCACCGGC GGCGGCTACA TCGGCAAAGG CGTGGACATC 
CAGACGATCC AGCGCAACTT CAGCGCGTTC CTGACGCGCC AGTCGGCACT GGCGAGCGCC 
ACCGGTGCAG CCGACAGCAG CCGGGCTGAT AAATTGAAGC AACTTGAAGG TATTTTTCCG 
GGTGGCACGG CCGGACTCGG TGCGGCGATC AACGACATGC TCAATGCGTT CTCGGACGTC 
GCCAATGCGC CCACCGATCT CACGGCCCGC ACGGTGGCGC TGACGCGCGT GGACGAAGCG 
GCCAAGCGCA TGCGGACTGC ATCACAAAAC CTGGACGACC TGCAGTCCGG CGTTGCACAG 
GAGCTCAGCC AGAAGGTCAG CAACATCAAC AGCCTGGCGA AAAGCATCGC CGACATCAAC 
GACAAAATAG CGCGCACCCA AGGCTCCGGC CAACCCCCCA ACGACCTGCT GGACCAGCGC 
GACCAATTGG TGCGAGACCT CAACCAATAT GTGCAAACCA GCTCGATCAC AGCCAGTGAT 
GGCACCGTCG GCATTTTTTT GGCTGGCAGC CAGGCCCTTG TTTTGGGCAG CACCGTGTCA 
CCGGTTTCCA TCGTCAAGGA TGACTTCGGC GACCCGCTGA AAAGCAAACT GGCGATCAGC 
CGTGGCGGGC AAGCCATTAC GCTGGATGAA AACGCGCTGG GCGGTGGTGA GGTGGCAGGC 
TTGCTGCGGT TCCAGAACAA TGATCTGGTG GAAGGACGCA ACCTGCTGGG TCGGCTCACG 
CTGGCCATCG GCACCAGCAT GAACAACCAG CACCAACTGG GGTTGGATCT GGATGGCAAT 
GCAGGCGGTA ATTTATTCAC CCCCACCGTT TTTGGCGCCG GCAACATACT CAAGCCCTCT 
GCGCCTGCGA CACTGAATAC CGGCACGGCC AGCCCGGCCC TGACCATCAG CGACGTCACC 
CAATTTGTCG CTTCTGACTA TGAAATGAAT TTCACGTCAG CCACATCGGG CAACATTACC 
CGGCGCTCCG ATGGGGTCGT CACTGCGTTT ACATCGGTAC CCATCACCAT CGATGGTCTG 
AACCTCTCCA TCCCTTCCGG CTCGGCCAAC CCAGGCGACC GGTTTCTGCT CAAGCCCTTC 
AGCACCGCCG CCAGCAACAT CAACGCCGAG TTTTCAGCGC CGCGCGCTTT GGCTGTGGCC 
AGTCCGGTGG CGGGCAGCCT GGGCACCGGC AACACCGGAA GCATGCAGCT CAGCAGTCTG 
CTGGCCCGCA GCAACCCGGT GGCTTCGACA CCCGTTGTGT TGACCTTTAC CGGGGCCAAC 
AGCTACACCC GCAGCGACGA GATTCCGGCA AACGCCACCA CATTCACCTA CACCTCAGGC 
CAGGTGATTG AGGGCACCAC ACCGGCCACC AACCCCCTGA GCCAATGGTC GCTGACGCTG 
CAAGGTGTTC CCAAGGCGGG CGATACCTTC ACCGTGCAGC AACAGCCTGC CGCTTTTCGC 
AACCTCAACG CCGGCAATGC CAGCGCCATG ACCGGCCTGC GCGACGTCGC CATGTTTGAC 
GGATCCGCCC TGAGCGATGG CTATGCCAGC CTGATCTCGC AAATTGGCAT CCGGACCCAG 
AGCGCCAACT ACTCGGCCCA GGTGTCGAGC TCGATAGCGG CCAATCTGGA GCGGGACCGC 
ACGGGCGTCT CGGGCGTCAA TCTGGACGAA GAGGCGGCCA AATTGCTGCA GTACCAGCAG 
GCTTACCAGG CGTCGGCCAA GATGATGCAG ATCGCACAGG GCATTTTTGA CACCCTGATT 
CAAACCCTGC GCTGA 

 

Protein sequence

MSGLLSVGTR ALQANQVMLQ TAGNNIANVN TPGYSRQSAV LQTSTGQFTG GGYIGKGVDI 
QTIQRNFSAF LTRQSALASA TGAADSSRAD KLKQLEGIFP GGTAGLGAAI NDMLNAFSDV 
ANAPTDLTAR TVALTRVDEA AKRMRTASQN LDDLQSGVAQ ELSQKVSNIN SLAKSIADIN 
DKIARTQGSG QPPNDLLDQR DQLVRDLNQY VQTSSITASD GTVGIFLAGS QALVLGSTVS 
PVSIVKDDFG DPLKSKLAIS RGGQAITLDE NALGGGEVAG LLRFQNNDLV EGRNLLGRLT 
LAIGTSMNNQ HQLGLDLDGN AGGNLFTPTV FGAGNILKPS APATLNTGTA SPALTISDVT 
QFVASDYEMN FTSATSGNIT RRSDGVVTAF TSVPITIDGL NLSIPSGSAN PGDRFLLKPF 
STAASNINAE FSAPRALAVA SPVAGSLGTG NTGSMQLSSL LARSNPVAST PVVLTFTGAN 
SYTRSDEIPA NATTFTYTSG QVIEGTTPAT NPLSQWSLTL QGVPKAGDTF TVQQQPAAFR 
NLNAGNASAM TGLRDVAMFD GSALSDGYAS LISQIGIRTQ SANYSAQVSS SIAANLERDR 
TGVSGVNLDE EAAKLLQYQQ AYQASAKMMQ IAQGIFDTLI QTLR