Gene Rfer_3716 details

Gene Information

• Locus tag: Rfer_3716
• ID: 3963250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4146672
• End bp: 4147343
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637918542
• Product: flagellar hook capping protein
• Protein accession: YP_524947
• Protein GI: 89902476
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTCCG CCACCTCCTC CGCCACCACC GCGACGAACA CCACGTCATC CACCAGCACC 
ACGTCATCCA CCAGCACCAC GGCGGCCAGC GACGCCAACG CGTCGCAAGA CCGCTTTCTG 
AAACTGCTGG TGGCGCAGCT CAACAATCAG GATCCGATGA ATCCGATGGA CAACGCGCAA 
ATGACCAGTC AAATGGCGCA GATCAACACC GTGACCGGCA TCCAGCAAGT CAATGAAACG 
CTCAAAAGCA TGGCAGCGCA GTTCACTTCG CTGCAGGTGC TGCAGGGCGC TTCCATGGTC 
GGCCATAACG TGCTGGTTGA AAGCAACACC TTGACCCGAA GCGCCGGAGT GGCCAGCGGC 
GCGCTTGATT TGGACGGCAA AGCCGATGCG GTCAAGGTGG AAATCCTGTC GCCAGGCGGT 
CAGGTGCTCG ACACCCTCAA TCTGGGCGCG CTGGGCGCGG GCCGGCATTC GTTTGACTGG 
GATGCCTCCG GCTATCAGGG TACCGGTGAG CCCAGCTTCA AGGTCACCGC CACGCTGGGG 
GGCCAGGCCG TCACCAACAC CGCACTGGCG CGCGATACGG TGACCTCGGT GGGTAGCGAC 
AACGGCGCCA TGACGGTCCA ATTGCAGGGG CGCGCTGCCG TGGCCTACAG CAGCGTCAAG 
GCCATTCTTT GA 

 

Protein sequence

MLSATSSATT ATNTTSSTST TSSTSTTAAS DANASQDRFL KLLVAQLNNQ DPMNPMDNAQ 
MTSQMAQINT VTGIQQVNET LKSMAAQFTS LQVLQGASMV GHNVLVESNT LTRSAGVASG 
ALDLDGKADA VKVEILSPGG QVLDTLNLGA LGAGRHSFDW DASGYQGTGE PSFKVTATLG 
GQAVTNTALA RDTVTSVGSD NGAMTVQLQG RAAVAYSSVK AIL