| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3706 |
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| Symbol | |
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| ID | 3962358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4137770 |
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| End bp | 4138927 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918532 |
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| Product | type III secretion exporter |
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| Protein accession | YP_524937 |
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| Protein GI | 89902466 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.700839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAA GCAGTCAGGA CCGCAATTTA CCCGCCTCTG AGCGCAAGCT GCAAAAGGCG
CTGGACGACG GGCAGGTCAG CCGCTCACGG GATCTGGGGC ATCTGGCGGT ATTGGGTACC
GGCGCCCTGA GCCTGATGGC GCTGGCACCC CTGATGTTTG ACCGGCTCAG GGTGCTGCTG
CGCCAGCAAC TCTCGTTTGA CGCGCTGGCG GTCAGCAACC CCACCACCAT GATCACCCGC
ATGCAGGACA TGGCCACGGC CGGGCTGATC GGTTGTGTGA TTTTTGCCGC CATTACGACC
GTGGCGGTGC TGCTCAGCAG CATCGCCGCC GGTGGCTGGG TGAGCAGCCT CAAGCCCATC
ATGCCGGACT TCAGCCGCCT CAATCCATTA ACGGGTATGG GGCGCATGTT CACCAAGGAA
AAGTTCACTG AAGTGCTCAA GATGAGCTTT GTCGCCGCCA TGCTGATCAC TCTGGGCACC
ACGTATTTGA GTTCCACCAT ACACGCCCTG GCGATGCTGG TTTTGCAACC CTCCCGCGCG
GCCCTTCCCA TGCTGACGGA GTGGCTGACC TCGGGGATGG CTTTGTTGCT GCTGGTGGTT
TTGCTGGTGG CGATGGTCGA TGTGCCGTTG CAGAGTTTTT TGCACAAGTC CCGGATGAAG
ATGTCACATC AGGAAATGAA GCAGGAACAC AAGGAGTCAG ACGGCAACCC GCAAATGAAA
GGCAAGCTGC GCCAGCGGCA ACGCGAGATT TCCCATGGCA ACAGTGTGGG TGCGGTGCCC
AAAGCCGACT TCGTGCTGAT GAACCCAACC CACTTTGCGG TGGCCATCAA ATACGACGAT
AAAACCATGC GTGCGCCCCA GGTCGTCTCC AAAGGCGCCG ACCTGCTGGC CATGAAGATC
CGCGACATCG CCAAAAATAA CGCTATTCCA GTGCTGCAGT CGCCGATGCT GGCGCGCGCG
CTGTATGCCC ATGCCGAGCT GGACCAGGAC ATTCCGGCCA GCCTGTACAC CGCGGTGGCT
CAGGTGCTGG CCTATATTTA CCGGCTCAAA GCCGCTCTGC GCGGCGACGG CCCGATGCCG
GGCGAGGCAC CGCAACCGTT TGTACCGCCC GAGCTTGATC CCCTGTCCAA GGTCGTGGCC
AACACGAGCG CAGCATGA
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| Protein sequence | MEPSSQDRNL PASERKLQKA LDDGQVSRSR DLGHLAVLGT GALSLMALAP LMFDRLRVLL
RQQLSFDALA VSNPTTMITR MQDMATAGLI GCVIFAAITT VAVLLSSIAA GGWVSSLKPI
MPDFSRLNPL TGMGRMFTKE KFTEVLKMSF VAAMLITLGT TYLSSTIHAL AMLVLQPSRA
ALPMLTEWLT SGMALLLLVV LLVAMVDVPL QSFLHKSRMK MSHQEMKQEH KESDGNPQMK
GKLRQRQREI SHGNSVGAVP KADFVLMNPT HFAVAIKYDD KTMRAPQVVS KGADLLAMKI
RDIAKNNAIP VLQSPMLARA LYAHAELDQD IPASLYTAVA QVLAYIYRLK AALRGDGPMP
GEAPQPFVPP ELDPLSKVVA NTSAA
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