| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3675 |
|---|
| Symbol | |
|---|
| ID | 3964043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4094696 |
|---|
| End bp | 4095772 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637918491 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_524906 |
|---|
| Protein GI | 89902435 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0294944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA TTGAACTTGA TCTGGCGCAT GCCTACGCGC CCAATCCCAA ACAGGACAGC
GACTACGCGC TTTTGCCTTT GAGAATGGCA TTTGAAGACG GCGGCGCCTA CGCGCTGCTG
GGCCCCTCAG GTTGCGGCAA GACCACCCTG CTCAACATCA TGTCGGGCTT GCTGGCGCCG
TCGCAGGGCA GCGTGCGTTT TGATGGCGTC GATGTCACGC GCGCCTCGCC GCAGGCGCGC
AACATTGCCC AGGTGTTTCA GTTCCCGGTG ATTTACGACA CCATGACGGT GGCAGAAAAC
CTGGCCTTTC CCTTGCGCAA TCGACAGGTG CCCAAAGCGC AGATCAAAAA ACGGGTGGGC
GAGATTGCCG AGATGCTGGA GATGAGCGGC CAGTTGAACC AGCTTGCCGC CAACCTGGCG
GCAGATGAAA AACAAAAAAT ATCCTTGGGT CGTGGCCTGG TGCGCCCCGA TGTGTCGGCG
GTGTTGTTCG ATGAGCCGCT GACGGTGATT GATCCGCATC TGAAATGGCA ACTGCGGCGC
AAGATCAAGC AGATTCACCA CGAGCTCAAG CTGACCATGA TCTACGTCAC GCACGATCAG
GTGGAGGCGT TGACCTTTGC CGATCACGTG GTGGTGATGG CGCGTGGCCG TGCGGTGCAG
GTGGGCTCGG CGGCTGAGCT GTTTGAACGC CCCAGCCATA CCTTTGTCGG GCATTTCATC
GGCTCGCCGG GCATGAATTT TTTGAGTGGC CAAGCCGATC AGACTGGTTT TCACGTTGCG
GACGCTGTCC TGGTGCCGCA GCCAGGGCAA GCGCTGCCGC CGGGTGTCAT CAAGTTGGGC
GTGCGGCCCG AGTATGTGCT GCTGGTGGCG CCGCACACAC CCGGCGCCCT GCCGATGACG
GTAGCGCAGG TGCAGGACGT GGGAACCCAC GTCATGTTGA GCACCAGTTT TGCCGGCCAG
ACCGTCAAGG CGCGCTTGCC GTCGGATGCC GGTCACTTGA GCCACGGCGA TACGGTCTGG
CTGCAAGTCC TGGGCGAGCA CACCTGCTTT TATCAAAATG AGGAGATCGT CGCATGA
|
|---|
| Protein sequence | MARIELDLAH AYAPNPKQDS DYALLPLRMA FEDGGAYALL GPSGCGKTTL LNIMSGLLAP
SQGSVRFDGV DVTRASPQAR NIAQVFQFPV IYDTMTVAEN LAFPLRNRQV PKAQIKKRVG
EIAEMLEMSG QLNQLAANLA ADEKQKISLG RGLVRPDVSA VLFDEPLTVI DPHLKWQLRR
KIKQIHHELK LTMIYVTHDQ VEALTFADHV VVMARGRAVQ VGSAAELFER PSHTFVGHFI
GSPGMNFLSG QADQTGFHVA DAVLVPQPGQ ALPPGVIKLG VRPEYVLLVA PHTPGALPMT
VAQVQDVGTH VMLSTSFAGQ TVKARLPSDA GHLSHGDTVW LQVLGEHTCF YQNEEIVA
|
|---|
| |